Job Description P13039 Confidence 99.96% Date Thu Jan 5 11:33:32 GMT 2012 Rank 28 Aligned Residues 229 % Identity 15% Template c1qfmA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:protein (prolyl oligopeptidase); PDBTitle: prolyl oligopeptidase from porcine muscle Resolution 1.40 Å

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		133	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.		.	.	.	.	170	.	.	.	.	.	.	.	.	.			180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																			.															.	.
Query SS confidence																																			.															.	.
Query Sequence		Q	A	P	E	I	P	A	K	E	I	I	W	K	S	E	R	L	K	K	S	R	R	V	W	I	F	T	T	G	D	A	T	A	.	E	E	R	P	L	A	V	L	L	D	G	E	F	W	.	.	A	Q	S	M	P	V	W	P	V	L	T	S	L	T	H	R	Q	Q	L	P	P	A	V	Y	V	L	I	D	A	I
Query Conservation																																			.															.	.
Alig confidence																	.																		.															.	.																		.	.	.	.
Template Conservation																	.																																																				.	.	.	.
Template Sequence		D	A	S	D	Y	Q	T	V	Q	I	F	Y	P	S	K	.	D	G	T	K	I	P	M	F	I	V	H	K	K	G	I	K	L	D	G	S	H	P	A	F	L	Y	G	Y	G	G	F	N	I	S	I	T	P	N	Y	S	V	S	R	L	I	F	V	R	H	M	G	.	.	.	.	G	V	L	A	V	A	N	I	R
Template Known Secondary structure			G	G	G											T	.	T	S											T	T				S	S		S										T	T																				.	.	.	.									T
Template Predicted Secondary structure																	.																																																				.	.	.	.
Template SS confidence
		431	.	.	.	.	.	.	.	.	440	.	.	.	.	.		.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.					.	.	.	500	.	.	.	.	.
		210	.	.	.	.	.	.	.	.			.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240		.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
Predicted Secondary structure											.	.																							.																																													.	.
Query SS confidence											.	.																							.																																													.	.
Query Sequence		D	T	T	H	R	A	H	E	L	.	.	P	C	N	A	D	F	W	L	A	V	Q	Q	E	L	L	P	L	V	K	A	I	A	.	P	F	S	D	R	A	D	R	T	V	V	A	G	Q	S	F	G	G	L	S	A	L	Y	A	G	L	H	W	P	E	R	F	G	C	V	L	S	Q	S	G	S	Y	W	W	.	.
Query Conservation											.	.																							.																																													.	.
Alig confidence											.	.																							.																																													.	.
Template Conservation
Template Sequence		G	G	G	E	Y	G	E	T	W	H	K	G	G	I	L	A	N	K	Q	N	C	F	D	D	F	Q	C	A	A	E	Y	L	I	K	E	G	Y	T	S	P	K	R	L	T	I	N	G	G	S	N	G	G	L	L	V	A	T	C	A	N	Q	R	P	D	L	F	G	C	V	I	A	Q	V	G	V	M	D	M	L	K
Template Known Secondary structure		T	S	S	T	T							T	T	S	G	G	G	T																	T	T	S			G	G	G							T														G	G	G		S						S					T	T	T
Template Predicted Secondary structure
Template SS confidence
		506	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.
																285	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.							310	.	.	.	.	.	.	.	.	.	320	.	.		.	.	.	.	.	.	.	330	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.														.															.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.														.															.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	H	R	G	G	Q	Q	E	G	V	L	L	E	K	L	K	A	G	E	V	S	A	E	G	L	.	.	.	.	.	.	R	I	V	L	E	A	G	I	R	E	P	M	I	.	M	R	A	N	Q	A	L	Y	A	Q	L	H	P	I	.	.	.	.	.	.	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.														.															.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.	.	.	.														.															.	.	.	.	.	.	.
Template Conservation
Template Sequence		F	H	K	Y	T	I	G	H	A	W	T	T	D	Y	G	S	D	S	K	Q	H	F	E	W	L	I	K	Y	S	P	L	H	N	V	K	L	P	E	A	D	D	I	Q	Y	P	S	M	L	L	L	T	A	D	H	D	D	R	V	V	P	L	H	S	L	K	F	I	A	T	L	Q	Y	I	V	G	R	S	R	K	Q
Template Known Secondary structure		G	G	G	S	T	T	G	G	G	G								S												G	G	G						S	S	T	T												T	T			S	S		T														T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.
		337	.	.	340	.	.	.	.	.	.	.		.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		K	E	S	I	F	W	R	Q	V	D	G	.	G	H	D	A	L	C	W	R	G	G	L	M	Q	G	L	I	D	L	W
Query Conservation													.
Alig confidence													.
Template Conservation
Template Sequence		N	N	P	L	L	I	H	V	D	T	K	A	G	H	G	A	G	K	P	T	A	K	V	I	E	E	V	S	D	M	F
Template Known Secondary structure			S								S	S			S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		667	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions