Job Description P13039 Confidence 98.28% Date Thu Jan 5 11:33:32 GMT 2012 Rank 204 Aligned Residues 100 % Identity 14% Template c1pjaA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:palmitoyl-protein thioesterase 2 precursor; PDBTitle: the crystal structure of palmitoyl protein thioesterase-2 reveals the2 basis for divergent substrate specificities of the two lysosomal3 thioesterases (ppt1 and ppt2) Resolution 2.70 Å

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		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure																														.	.
Query SS confidence																														.	.
Query Sequence		R	P	L	A	V	L	L	D	G	E	F	W	A	Q	S	M	P	V	W	P	V	L	T	S	L	T	H	R	.	.	Q	Q	L	P	P	A	V	Y	V	L	I	D	A	I	D	T	T	H	R	A	H	E	L	P	C	N	A	D	F	W	L	A	V	Q	Q	E	L	L	P	L	V	K	A	I	A	P	F	S	D	R
Query Conservation																														.	.
Alig confidence																		.												.	.				.	.	.	.									.	.	.																												.	.	.	.	.
Template Conservation																		.																	.	.	.	.									.	.	.																												.	.	.	.	.
Template Sequence		Y	K	P	V	I	V	V	H	G	L	F	D	S	S	Y	S	.	F	R	H	L	L	E	Y	I	N	E	T	H	P	G	T	V	.	.	.	.	V	T	V	L	D	L	F	D	.	.	.	G	R	E	S	L	R	P	L	W	E	Q	V	Q	G	F	R	E	A	V	V	P	I	M	A	K	A	P	.	.	.	.	.
Template Known Secondary structure											T	T			G	G	G	.	G											S	T	T			.	.	.	.						S	S		.	.	.	S	G	G	G	G	S																					T	.	.	.	.	.
Template Predicted Secondary structure																		.																	.	.	.	.									.	.	.																												.	.	.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.		.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.					.	.	70	.	.	.	.	.				.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	D	R	T	V	V	A	G	Q	S	F	G	G	L	S	A	L	Y	A	G	L	H	W	P	E	R	F	G	C	V	L	S	Q	S	G	S
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	Q	G	V	H	L	I	C	Y	S	Q	G	G	L	V	C	R	A	L	L	S	V	M	D	D	H	N	V	D	S	F	I	S	L	S	S
Template Known Secondary structure		.	T								T														T	T										S
Template Predicted Secondary structure		.
Template SS confidence
			103	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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