Return to main results Retrieve Phyre Job Id

Job DescriptionP37018
Confidence99.88%DateThu Jan 5 11:54:29 GMT 2012
Rank8Aligned Residues148
% Identity14%Templated2uy6b1
SCOP infoCommon fold of diphtheria toxin/transcription factors/cytochrome f Bacterial adhesins Pilus subunits
Resolution2.50

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   27..30.........40.........50.........60.........70.........80.........90.........100......
Predicted Secondary structure 












































Query SS confidence 















































































Query Sequence  NVEFTATVKATTCNITLTGNNVTNDGNNNYTLRIPKMGLDKIANKTTESQADFKLVASGCSSGISWIDTTLTGNASSSSP
Query Conservation   
 
 
 
   

 
                
                      
    
                    
Alig confidence 

















........





















































Template Conservation   
 
 
 
   

 
   ........     
 

 
               
 
 
  
                 
  
Template Sequence  KVTFNNTVVDAPCSISQK. . . . . . . . SADQSIDFGQLSKSFLEAGGVSKPMDLDIELVNCDITAFKGGKGTVKLAFTGPI
Template Known Secondary structure 













S........STT








T




SS

TTTB



S

Template Predicted Secondary structure 





........

























Template SS confidence 















































































   10.........20....... ..30.........40.........50.........60.........70.........80.
 
   107..110.........120.........130.........140.........150.........160......... 170.........180....
Predicted Secondary structure 





































..


Query SS confidence 






























































. .














Query Sequence  KLIIPQSGDSSSTTSNIGMGFKKRTTDDATFLKPNSAEKIRWSTDEMQPDKGLEMTVALRETD. . AGQGVPGNFRALATF
Query Conservation               
 



 
                                   
      ..   

 
   
  

Alig confidence 




.


































......















..














Template Conservation       .       
 



 
                    ......       
 
           
  
   
  
 
Template Sequence  VNGHS. DELDTNGGTGLAIVVQGAGKNVVFDGSEGDANTLK. . . . . . DGENVLHYTAVVKKSSAVGAAVTEGAFSAVANF
Template Known Secondary structure  TT.
BSSS

SSSB




TT
B
......SS



STT



SS

B


Template Predicted Secondary structure 




.


















......











Template SS confidence 















































































   86...90 .........100.........110.........120..... ....130.........140.........150........
 
   185....
Predicted Secondary structure 
Query SS confidence 




Query Sequence  NFIYQ
Query Conservation   
 

Alig confidence 




Template Conservation   
 

Template Sequence  NLTYQ
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 




   159160...
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions