|   |
27 | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
N | V | E | F | T | A | T | V | K | A | T | T | C | N | I | T | L | T | G | N | N | V | T | N | D | G | N | N | N | Y | T | L | R | I | P | K | M | G | L | D | K | I | A | N | K | T | T | E | S | Q | A | D | F | K | L | V | A | S | G | C | S | S | G | I | S | W | I | D | T | T | L | T | G | N | A | S | S | S | S | P |
Query Conservation |   |
  |
|   |
|   |
|   |
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|   |
|   |
|   |
|   |   |   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . |   |   |   |   |   |
|   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
Template Sequence |   |
K | V | T | F | N | N | T | V | V | D | A | P | C | S | I | S | Q | K | . |
. |
. |
. |
. |
. |
. |
. |
S | A | D | Q | S | I | D | F | G | Q | L | S | K | S | F | L | E | A | G | G | V | S | K | P | M | D | L | D | I | E | L | V | N | C | D | I | T | A | F | K | G | G | K | G | T | V | K | L | A | F | T | G | P | I |
Template Known Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |
| S | . | . | . | . | . | . | . | . | S | T | T |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  | T |
|
|
|
|
|  |  |  |  |  |  |  |  | S | S |
|
| T | T | T | B |
|
|
|
| S |  |  |  |  |  |  |
|
|  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
| . | . | . | . | . | . | . | . |
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
107 | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | |
|
170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
| . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | L | I | I | P | Q | S | G | D | S | S | S | T | T | S | N | I | G | M | G | F | K | K | R | T | T | D | D | A | T | F | L | K | P | N | S | A | E | K | I | R | W | S | T | D | E | M | Q | P | D | K | G | L | E | M | T | V | A | L | R | E | T | D | . |
. |
A | G | Q | G | V | P | G | N | F | R | A | L | A | T | F |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   | . | . |   |   |   |
|
|   |
|   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   | . |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |
|   |   |
|   |
Template Sequence |   |
V | N | G | H | S | . |
D | E | L | D | T | N | G | G | T | G | L | A | I | V | V | Q | G | A | G | K | N | V | V | F | D | G | S | E | G | D | A | N | T | L | K | . |
. |
. |
. |
. |
. |
D | G | E | N | V | L | H | Y | T | A | V | V | K | K | S | S | A | V | G | A | A | V | T | E | G | A | F | S | A | V | A | N | F |
Template Known Secondary structure |   |
 | T | T |  |  | . |  |  |  |  |
| B | S | S | S |
|  |  |  |  |  |  |
| S | S | S | B |
|
|
|  |  |  |  |
|
| T | T |
| B |
| . | . | . | . | . | . | S | S |
|
|  |  |  |  |  |  |  |  |  |  |
|
| S | T | T |
|
|
|
| S | S |
|
| B |
|
|
|  |  |
Template Predicted Secondary structure |   |
|
|
|
|
| . |
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |
| . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | |
. | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . |
  |
  |   |
185 | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
Query Sequence |   |
N | F | I | Y | Q |
Query Conservation |   |
  |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
Template Conservation |   |
  |
|   |
|
|
Template Sequence |   |
N | L | T | Y | Q |
Template Known Secondary structure |   |
 |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |  |  |
|
Template SS confidence |   |
|
|
|
|
|
  |   |
159 | 160 | . | . | . |
  |