 |
Job Description | P37018 | Confidence | 1.24% | Date | Thu Jan 5 11:54:29 GMT 2012 |
Rank | 47 | Aligned Residues | 63 |
% Identity | 13% | Template | d1ttaa_ |
SCOP info | Prealbumin-like
| Transthyretin (synonym: prealbumin)
| Transthyretin (synonym: prealbumin)
|
Resolution | 1.70 |
|
 |
  |   |
99 | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | |
|
|
|
|
|
|
. | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . |
Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
| . | . | . | . | . | . | . |
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | N | A | S | S | S | S | P | K | L | I | I | P | Q | S | G | D | S | S | S | T | T | S | N | I | G | M | G | F | K | K | R | T | T | D | D | . |
. |
. |
. |
. |
. |
. |
A | T | F | L | K | P | N | S | A | E | K | I | R | W | S | T | D | E | M | Q | P | D | K | G | L | E | M |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |
|
|
|
|   |
|   |   |   |   |   |   |   | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|   |
|
|
|
|
|
|
|
|
|   |   |
|   |
|
|
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|
|   |
|
|
|
|   |   |
|   |   |   |   |   |   |   |   |
|   |
|   |
|   |
|
Template Sequence |   |
G | T | G | E | S | K | C | P | L | M | V | K | V | L | D | A | V | R | G | S | P | A | I | N | V | A | V | H | V | F | R | K | A | A | D | D | T | W | E | P | F | A | S | G | K | T | S | E | S | G | E | L | H | G | L | T | T | E | E | E | F | V | E | G | I | Y | K | V | E | I |
Template Known Secondary structure |   |
S | S | S |
| S | S |
|
|  |  |  |  |  |  |  | T | T | T | T |  |  |
|
| S |
|  |  |  |  |  |  |  |
| T | T | S |
|  |  |  |  |  |  |  |  |
|
| T | T | S |  |  |
|
| S |
|
| T | T | T |
|
| S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|