Job Description P37902 Confidence 24.16% Date Thu Jan 5 11:57:43 GMT 2012 Rank 88 Aligned Residues 169 % Identity 13% Template d2ozza1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 2.30

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		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.							.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure																					.																								.	.	.	.	.	.
Query SS confidence																					.																								.	.	.	.	.	.
Query Sequence		A	V	K	K	K	L	N	K	P	D	L	Q	V	K	L	I	P	I	T	.	S	Q	N	R	I	P	L	L	Q	N	G	T	F	D	F	E	C	G	S	T	T	N	N	.	.	.	.	.	.	V	E	R	Q	K	Q	A	A	F	S	D	T	I	F	V	V	G	T	R	L	L	T	K	K	G	G	D	I	K	D	F
Query Conservation																					.																								.	.	.	.	.	.
Alig confidence																					.																								.	.	.	.	.	.																															.
Template Conservation																																																																																	.
Template Sequence		A	S	G	L	K	A	Q	F	D	G	I	P	F	Y	Y	A	H	X	R	G	A	D	I	R	V	E	C	L	L	N	G	V	Y	D	X	A	V	V	S	R	L	A	A	E	S	Y	L	S	Q	N	N	L	C	I	A	L	E	L	G	P	H	T	Y	V	G	E	H	Q	L	I	C	R	K	G	E	S	G	N	V	.
Template Known Secondary structure								T	T	T	T	S								S											T	T	S		S																S										T	T	S	S	S									T	T		G	G	G		.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		31	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	N	L	K	D	K	A	V	V	V	T	S	G	T	T	S	E	V	L	L	N	K	L	N	E	E	Q	K	M	N	M	R	I	I	S	A	K	D	H	G	D	S	F	R	T	L	E	S	G	R	A	V	A	F	M	M	D	D	A	L	L	A	G	E	R	A	K	A	K	K	P	D	N	W	E	I	V	G	K	P
Query Conservation
Alig confidence		.	.	.	.	.	.	.																																																																						.
Template Conservation		.	.	.	.	.	.	.																																																																						.
Template Sequence		.	.	.	.	.	.	.	K	R	V	G	L	D	S	R	S	A	D	Q	K	I	X	T	D	V	F	F	G	D	S	D	V	E	R	V	D	L	S	Y	H	E	S	L	Q	R	I	V	K	G	D	V	D	A	V	I	W	N	V	A	E	N	E	L	T	X	L	G	L	E	A	T	P	L	T	D	D	.	P	R	F
Template Known Secondary structure		.	.	.	.	.	.	.							T	T													T	T	S																			T	S																T	T								S		.
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																																						.
Template SS confidence
									110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.
		229	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	S	Q	E	A	Y	G	C	M	L	R	K	D	D	P	Q	F	K	K	L	M	D	D	T	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	Q	A	T	E	A	V	V	L	T	R	V	D	D	Y	P	X	Q	Q	L	L	R	A	V	V
Template Known Secondary structure				T	T								T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions