Job Description P37902 Confidence 99.95% Date Thu Jan 5 11:57:43 GMT 2012 Rank 34 Aligned Residues 218 % Identity 17% Template d2f34a1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.74

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		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
Predicted Secondary structure																								.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Query Sequence		V	I	V	V	G	H	R	E	S	S	V	P	F	S	Y	Y	D	N	Q	Q	K	V	.	.	.	.	.	.	.	V	G	Y	S	Q	D	Y	S	N	A	I	V	E	A	V	K	K	K	L	N	K	P	D	L	Q	V	K	L	I	P	I	T	S	Q	N	R	I	P	L	L	Q	N	G	.	.	.	.	.	.	.	.
Query Conservation																								.	.	.	.	.	.	.																																												.	.	.	.	.	.	.	.
Alig confidence								.																.	.	.	.	.	.	.																	.	.	.	.	.	.	.																					.	.	.	.	.	.	.	.
Template Conservation								.																																							.	.	.	.	.	.	.
Template Sequence		T	L	I	V	T	T	.	I	L	E	E	P	Y	V	M	Y	R	K	S	D	K	P	L	Y	G	N	D	R	F	E	G	Y	C	L	D	L	L	K	E	L	S	N	I	L	G	.	.	.	.	.	.	.	F	L	Y	D	V	K	L	V	P	D	G	K	Y	G	A	Q	N	D	K	G	E	W	N	G	M	V	K	E
Template Known Secondary structure								.			B	T	T	T	B				S			S				G	G	G	G			S														T	.	.	.	.	.	.	.									T	T						B		T	T	S		B
Template Predicted Secondary structure								.																																							.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.								.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
						106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
Predicted Secondary structure		.	.	.	.																																																																				.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																																																																				.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	T	F	D	F	E	C	G	S	T	T	N	N	V	E	R	Q	K	Q	A	A	F	S	D	T	I	F	V	V	G	T	R	L	L	T	K	K	G	G	D	I	K	D	F	A	N	L	K	D	K	A	V	V	V	T	S	G	T	T	S	E	V	L	L	N	K	L	N	.	.	.	.	.	.	.	.	.
Query Conservation		.	.	.	.																																																																				.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																																																																				.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	I	D	H	R	A	D	L	A	V	A	P	L	T	I	T	Y	V	R	E	K	V	I	D	F	S	K	P	F	M	T	L	G	I	S	I	L	Y	R	K	P	I	D	S	A	D	D	L	A	K	Q	T	K	I	E	Y	G	A	V	R	D	G	S	T	M	T	F	F	K	K	S	K	I	S	T	Y	E	K	M	W
Template Known Secondary structure				T	T	S		S				S	S		B							T	T					S		S															S						T		S	S	S					B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	Q	K	M	N	M	R	I	I	S	A	K	D	H	G	D	S	F	R	T	L	E	S	G	R	A	V	A	F	M	M	D	D	A	L	L	A	G	E	R	A	K	A	K	K	P	D	N	W	E	I	V	G	K	P	Q	S	Q	E	A	Y	G	C	M	L	R	K	D	D	P	Q	F	K	K	L	M	D	D	T
Query Conservation
Alig confidence																																												.	.	.	.																										.
Template Conservation																																												.	.	.	.																										.
Template Sequence		A	F	M	S	S	R	Q	Q	S	A	L	V	K	N	S	D	E	G	I	Q	R	V	L	T	T	D	Y	A	L	L	M	E	S	T	S	I	E	Y	V	T	Q	R	.	.	.	.	N	C	N	L	T	Q	I	G	G	L	I	D	S	K	G	Y	G	V	G	T	P	I	G	S	P	.	Y	R	D	K	I	T	I	A
Template Known Secondary structure							T					S	B	S	S											S	S																	.	.	.	.		T	T					S	S		S	S										T	T		T	.	T
Template Predicted Secondary structure																																												.	.	.	.																										.
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200					.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.		.	.	.	.	230	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	Q	V	Q	T	S	G	E	A	E	K	W	F	D	K	W	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	Q	L	Q	E	E	G	K	L	H	M	M	K	E	K	W	W	R
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions