Job Description P37902 Confidence 100.00% Date Thu Jan 5 11:57:43 GMT 2012 Rank 24 Aligned Residues 229 % Identity 19% Template d2a5sa1 SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.												.	.	.	.	.	100	.	.	.	.
Predicted Secondary structure																																																													.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																													.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	K	N	G	V	I	V	V	G	H	R	E	S	S	V	P	F	S	Y	Y	D	N	Q	Q	K	V	V	G	Y	S	Q	D	Y	S	N	A	I	V	E	A	V	K	K	K	L	N	K	P	D	L	Q	V	K	L	I	P	I	T	.	.	.	.	.	.	.	.	.	.	.	S	Q	N	R	I	P	L	L	Q	N
Query Conservation																																																													.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																													.	.	.	.	.	.	.
Template Sequence		V	R	N	T	V	P	C	R	K	F	V	K	I	N	N	S	T	N	E	G	M	N	V	K	K	C	C	K	G	F	C	I	D	I	L	K	K	L	S	R	T	V	K	.	.	.	.	.	.	.	F	T	Y	D	L	Y	L	V	T	N	G	K	H	G	K	K	V	N	N	V	W	N	G	M	I	G	E	V	V	Y
Template Known Secondary structure			T	T										S	S	S	S	S	S											S														T	.	.	.	.	.	.	.										S	S	S	S					T	T											T
Template Predicted Secondary structure																																													.	.	.	.	.	.	.
Template SS confidence
		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.								.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.								.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.
Query Sequence		G	T	F	D	F	E	C	G	S	T	T	N	N	V	E	R	Q	K	Q	A	A	F	S	D	T	I	F	V	V	G	T	R	L	L	T	K	K	G	G	D	I	.	.	.	.	.	.	.	K	D	F	A	N	L	K	D	K	A	V	V	V	T	S	G	T	T	S	E	V	L	L	N	K	L	N	E	E	Q	K	M
Query Conservation																																											.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	A	V	M	A	V	G	S	L	T	I	N	E	E	R	S	E	V	V	D	F	S	V	P	F	V	E	T	G	I	S	V	M	V	S	R	Q	V	T	G	L	S	D	K	K	F	Q	R	P	H	D	Y	S	P	P	F	R	F	G	T	V	P	N	G	S	T	E	R	N	I	R	N	N	Y	P	Y	M	H	Q
Template Known Secondary structure		T	S		S				S	S		B							T	T																						S	T	T	S					S	G	G	G	S	S	S								T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		106	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.		.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
Predicted Secondary structure																																																	.
Query SS confidence																																																	.
Query Sequence		N	M	R	I	I	S	A	K	D	H	G	D	S	F	R	T	L	E	S	G	R	A	V	A	F	M	M	D	D	A	L	L	A	G	E	R	A	K	A	K	K	P	D	N	W	E	I	.	V	G	K	P	Q	S	Q	E	A	Y	G	C	M	L	R	K	D	D	P	Q	F	K	K	L	M	D	D	T	I	A	Q	V
Query Conservation																																																	.
Alig confidence																																																	.																				.
Template Conservation																																																																					.
Template Sequence		Y	M	T	R	F	N	Q	R	G	V	E	D	A	L	V	S	L	K	T	G	K	L	D	A	F	I	Y	D	A	A	V	L	N	Y	K	A	G	R	D	E	G	C	K	L	V	T	I	G	S	G	Y	I	F	A	T	T	G	Y	G	I	A	L	Q	K	G	S	P	.	W	K	R	Q	I	D	L	A	L	L	Q	F
Template Known Secondary structure				G	G	G			S	S										T	T	S		S															T		T	T	S										G	G	G										T	T		T	.	T
Template Predicted Secondary structure																																																																					.
Template SS confidence
		188	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.		.	.	.	.	.	260	.	.	.	.	.	.
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	T	S	G	E	A	E	K	W	F	D	K	W	F	K	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	G	D	G	E	M	E	E	L	E	T	L	W	L	T	G
Template Known Secondary structure					T										T
Template Predicted Secondary structure
Template SS confidence
		267	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions