Job Description P37902 Confidence 93.98% Date Thu Jan 5 11:57:43 GMT 2012 Rank 59 Aligned Residues 194 % Identity 13% Template d1us5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.5

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		60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.		.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.														.	.	.	.
Predicted Secondary structure																																					.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																					.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		Q	K	V	V	G	Y	S	Q	D	Y	S	N	A	I	V	E	A	V	K	K	K	L	N	K	P	D	L	Q	V	K	L	I	P	I	T	.	S	Q	N	R	I	P	L	L	Q	N	G	T	F	D	F	E	C	G	S	T	T	N	N	V	E	R	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	K	Q	A	A
Query Conservation																																					.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.													.																												.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																							.	.
Template Sequence		G	S	T	T	G	V	Y	F	P	V	A	T	G	I	A	K	L	V	N	D	A	.	.	N	V	G	I	R	A	N	A	R	S	T	G	G	S	V	A	N	I	N	A	I	N	A	G	E	F	E	M	A	L	A	Q	N	D	I	A	Y	Y	A	Y	Q	G	C	C	I	P	A	F	E	G	K	P	V	K	T	I	R
Template Known Secondary structure				T	T	S	S																.	.	T	S	S									S											T	T	S		S															T		S	S	T	T	T	T	T				T	T
Template Predicted Secondary structure																							.	.
Template SS confidence
		26	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.			.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180					.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure																																																									.	.	.	.
Query SS confidence																																																									.	.	.	.
Query Sequence		F	S	D	T	I	F	V	V	G	T	R	L	L	T	K	K	G	G	D	I	K	D	F	A	N	L	K	D	K	A	V	V	V	T	S	G	T	T	S	E	V	L	L	N	K	L	N	E	E	Q	K	M	N	M	R	.	.	.	.	I	I	S	A	K	D	H	G	D	S	F	R	T	L	E	S	G	R	A	V	A
Query Conservation																																																									.	.	.	.
Alig confidence																																																									.	.	.	.
Template Conservation
Template Sequence		A	L	A	A	L	Y	P	E	V	V	H	V	V	A	R	K	D	A	G	I	R	T	V	A	D	L	K	G	K	R	V	V	V	G	D	V	G	S	G	T	E	Q	N	A	R	Q	I	L	E	A	Y	G	L	T	F	D	D	L	G	Q	A	I	R	V	S	A	S	Q	G	I	Q	L	M	Q	D	K	R	A	D	A
Template Known Secondary structure																	T	T	S	S		S	S	G	G	G	G	T	T	S							T	T														T	T			G	G	G	S	S																T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.																																	230	.	.	.	.	.	.	.	.	.	240	.		.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Query Sequence		F	M	M	D	D	A	L	L	A	G	E	R	A	K	A	K	K	P	D	N	W	E	I	V	G	K	P	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	Q	E	A	Y	G	C	M	L	R	K	D	.	D	P	Q	F	K	K	L
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.													.
Template Conservation
Template Sequence		L	F	Y	T	V	G	L	G	A	S	A	I	Q	Q	L	A	L	T	T	P	I	A	L	V	A	V	D	L	N	R	I	Q	A	I	A	K	K	Y	P	F	Y	V	G	F	N	I	P	G	G	T	Y	K	G	V	D	V	T	T	P	T	V	A	V	Q	A	M	L	I	A	S	E	R	L	S	E	E	T	V	Y	K
Template Known Secondary structure								T	T											S														T	T	T	T	T		T	T								T	T	S	B	T	T	B		S															T	T	S
Template Predicted Secondary structure
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
		249	250	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	D	D	T	I	A	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	M	K	A	V	F	G
Template Known Secondary structure								S
Template Predicted Secondary structure
Template SS confidence
		264	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions