Job Description P37902 Confidence 99.97% Date Thu Jan 5 11:57:43 GMT 2012 Rank 28 Aligned Residues 223 % Identity 19% Template d1pb7a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.35

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.								.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure																											.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																											.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	N	G	V	I	V	V	G	H	R	E	S	S	V	P	F	S	Y	Y	D	N	Q	Q	K	V	.	.	.	.	.	.	.	V	G	Y	S	Q	D	Y	S	N	A	I	V	E	A	V	K	K	K	L	N	K	P	D	L	Q	V	K	L	I	P	I	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																											.	.	.	.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																											.	.	.	.	.	.	.																	.	.	.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.
Template Sequence		S	D	G	T	C	K	E	E	F	T	V	N	G	D	P	V	K	K	V	I	C	T	G	P	N	H	T	V	P	Q	C	C	Y	G	F	C	I	D	L	L	I	K	L	A	R	T	M	N	.	.	.	.	.	.	.	F	T	Y	E	V	H	L	V	A	D	G	K	F	G	T	Q	E	R	V	N	N	S	N	K	K
Template Known Secondary structure		T	T	S	S					B		T	T	S		B																			S														T	.	.	.	.	.	.	.									T	T										T	T	S	S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.
Template SS confidence
		24	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.								.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.
			95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.							.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure		.																																																													.	.	.	.	.	.
Query SS confidence		.																																																													.	.	.	.	.	.
Query Sequence		.	S	Q	N	R	I	P	L	L	Q	N	G	T	F	D	F	E	C	G	S	T	T	N	N	V	E	R	Q	K	Q	A	A	F	S	D	T	I	F	V	V	G	T	R	L	L	T	K	K	G	G	D	I	K	D	F	A	N	L	K	D	K	.	.	.	.	.	.	A	V	V	V	T	S	G	T	T	S	E	V	L
Query Conservation		.																																																													.	.	.	.	.	.
Alig confidence		.																																																													.	.	.	.	.	.
Template Conservation
Template Sequence		E	W	N	G	M	M	G	E	L	L	S	G	Q	A	D	M	I	V	A	P	L	T	I	N	N	E	R	A	Q	Y	I	E	F	S	K	P	F	K	Y	Q	G	L	T	I	L	V	K	K	G	T	R	I	T	G	I	N	D	P	R	L	R	N	P	S	D	K	F	I	Y	A	T	V	K	Q	S	S	V	D	I	Y
Template Known Secondary structure													T	S		S				S	S		B							T	T					S		S											T	T					S	T	T						S		B	T	T	B					B	T	T	S
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		168	.	170	.	.	.	.	.	.			.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		L	N	K	L	N	E	E	Q	K	.	.	M	N	M	R	I	I	S	A	K	D	H	G	D	S	F	R	T	L	E	S	G	R	A	V	A	F	M	M	D	D	A	L	L	A	G	E	R	A	K	A	K	K	P	D	N	W	E	I	V	G	K	P	Q	S	Q	E	A	Y	G	C	M	L	R	K	D	D	P	Q	F
Query Conservation											.	.
Alig confidence											.	.																																								.	.	.																										.
Template Conservation																																																				.	.	.																										.
Template Sequence		F	R	R	Q	V	E	L	S	T	M	Y	R	H	M	E	K	H	N	Y	E	S	A	A	E	A	I	Q	A	V	R	D	N	K	L	H	A	F	I	W	D	S	A	V	L	E	F	E	A	S	Q	.	.	.	K	C	D	L	V	T	T	G	E	L	F	F	R	S	G	F	G	I	G	M	R	K	D	S	P	.	W
Template Known Secondary structure				T		G	G	G								T	T	T		B	S	S										T	T	S		S																.	.	.		T	T					S	S		S											T	T		S	.	S
Template Predicted Secondary structure																																																				.	.	.																										.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.				.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.		260
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	K	L	M	D	D	T	I	A	Q	V	Q	T	S	G	E	A	E	K	W	F	D	K	W	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	Q	N	V	S	L	S	I	L	K	S	H	E	N	G	F	M	E	D	L	D	K	T	W	V	R
Template Known Secondary structure															S	S										T	S
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions