Job Description P37902 Confidence 97.11% Date Thu Jan 5 11:57:43 GMT 2012 Rank 48 Aligned Residues 213 % Identity 15% Template d1p99a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.70

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.		.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.					.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																																	.																				.	.	.	.
Query SS confidence																																	.																				.	.	.	.
Query Sequence		V	V	G	Y	S	Q	D	Y	S	N	A	I	V	E	A	V	K	K	K	L	N	K	P	D	L	Q	V	K	L	I	P	.	I	T	S	Q	N	R	I	P	L	L	Q	N	G	T	F	D	F	E	C	.	.	.	.	G	S	T	T	N	N	V	E	R	Q	K	Q	A	A	F	S	D	T	I	F	V	V	G	T	R
Query Conservation																																	.																				.	.	.	.
Alig confidence																			.	.	.	.											.																				.	.	.	.
Template Conservation																			.	.	.	.
Template Sequence		V	A	S	N	D	T	K	A	W	E	K	V	K	E	L	A	K	.	.	.	.	K	D	D	I	D	V	E	I	K	H	F	S	D	Y	N	L	P	N	K	A	L	N	D	G	D	I	D	M	N	A	F	Q	H	F	A	F	L	D	Q	Y	K	K	A	H	K	G	T	K	I	S	A	L	S	T	T	V	L	A	P
Template Known Secondary structure			S	S	S													G	.	.	.	.	G	G	T									S	S	T	T	S							T	T	S	S	S																		T	T
Template Predicted Secondary structure																			.	.	.	.
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.					.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.																			.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		L	L	T	K	K	G	G	D	I	K	D	F	A	N	L	K	D	K	A	V	V	V	T	S	G	T	T	S	E	V	L	L	N	K	L	N	E	E	Q	K	M	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	M	R	I	I	S	A	K	D	H	G	D	S	F	R	T	L	E	S	G	R
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	I	Y	S	D	K	I	K	D	V	K	K	V	K	D	G	A	K	V	V	I	P	N	D	V	S	N	Q	A	R	A	L	K	L	L	E	A	A	G	L	I	K	L	K	K	D	F	G	L	A	G	T	V	K	D	I	T	S	N	P	K	H	L	K	I	T	A	V	D	A	Q	Q	T	A	R	A	L	S	D
Template Known Secondary structure							S	S		S		G	G	G			T	T								S														T	T	S					T	T			T	T			G	G	G					T	T									G	G	G	T	T	G	G	G	G	T
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		199	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.			.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.			.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.
Predicted Secondary structure																											.	.																			.	.
Query SS confidence																											.	.																			.	.
Query Sequence		A	V	A	F	M	M	D	D	A	L	L	A	G	E	R	A	K	A	K	K	P	D	N	W	E	.	.	I	V	G	K	P	Q	S	Q	E	A	Y	G	C	M	L	R	K	D	.	.	D	P	Q	F	K	K	L	M	D	D	T	I	A	Q	V	Q	T	S	G	E	A	E	K	W	F	D	K	W	F	K	N	P	I
Query Conservation																											.	.																			.	.
Alig confidence																											.	.																			.	.													.	.	.	.
Template Conservation																																																													.	.	.	.
Template Sequence		V	D	I	A	V	I	N	N	G	V	A	T	K	A	G	K	D	P	K	N	D	P	I	F	L	E	K	S	N	S	D	A	V	K	P	Y	I	N	I	V	A	V	N	D	K	D	L	D	N	K	T	Y	A	K	I	V	E	L	Y	.	.	.	.	H	S	K	E	A	Q	K	A	L	Q	E	D	V	K	D	G	E
Template Known Secondary structure		S	S												T	T			T	T	T	S		S						S	S	G	G	G	G	G	G								G	G	G	T	T												.	.	.	.		S												T	T	S	S
Template Predicted Secondary structure																																																													.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.					260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.
		275	.	.	.	.	280	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	P	K	N	L	N	M	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	P	V	N	L	S	K	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		277	.	.	280	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions