Job Description P37902 Confidence 99.96% Date Thu Jan 5 11:57:43 GMT 2012 Rank 30 Aligned Residues 220 % Identity 17% Template d1ii5a_ SCOP info Periplasmic binding protein-like II Periplasmic binding protein-like II Phosphate binding protein-like Resolution 1.60

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
Predicted Secondary structure																																																										.
Query SS confidence																																																										.
Query Sequence		K	N	G	V	I	V	V	G	H	R	E	S	S	V	P	F	S	Y	Y	D	N	Q	Q	K	V	V	G	Y	S	Q	D	Y	S	N	A	I	V	E	A	V	K	K	K	L	N	K	P	D	L	Q	V	K	L	I	P	I	.	T	S	Q	N	R	I	P	L	L	Q	N	G	T	F	D	F	E	C	G	S	T	T	N
Query Conservation																																																										.
Alig confidence												.									.	.	.																				.	.	.	.	.	.	.									.
Template Conservation												.									.	.	.																				.	.	.	.	.	.	.
Template Sequence		S	A	M	A	L	K	V	G	V	V	.	G	N	P	P	F	V	F	Y	.	.	.	G	A	F	T	G	I	S	L	D	V	W	R	A	V	A	E	S	Q	K	.	.	.	.	.	.	.	W	N	S	E	Y	V	R	Q	N	S	I	S	A	G	I	T	A	V	A	E	G	E	L	D	I	L	I	G	P	I	S	V
Template Known Secondary structure			S									.			T	T	T				.	.	.					S														T	.	.	.	.	.	.	.									S											T	T	S		S
Template Predicted Secondary structure												.									.	.	.																				.	.	.	.	.	.	.
Template SS confidence
		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.				20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.								.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	E	R	Q	K	Q	A	A	F	S	D	T	I	F	V	V	G	T	R	L	L	T	K	K	G	G	D	I	K	D	F	A	N	L	K	D	K	A	V	V	V	T	S	G	T	T	S	E	V	L	L	N	K	L	N	E	E	Q	K	M	N	M	R	I	I	S	A	K	D	H	G	D	S	F	R	T	L	E	S
Query Conservation
Alig confidence																																																												.	.
Template Conservation																																																												.	.
Template Sequence		T	P	E	R	A	A	I	E	G	I	T	F	T	Q	P	Y	F	S	S	G	I	G	L	L	I	P	G	T	A	T	P	L	F	R	S	V	G	D	L	K	N	K	E	V	A	V	V	R	D	T	T	A	V	D	W	A	N	F	.	.	Y	Q	A	D	V	R	E	T	N	N	L	T	A	A	I	T	L	L	Q	K
Template Known Secondary structure							T	S	T	T																		G	G	G	T	T	T		S	S	G	G	G	G	T	T							T	T	S									.	.	T	T							S	S										T
Template Predicted Secondary structure																																																												.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.			.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	R	A	V	A	F	M	M	D	D	A	L	L	A	G	E	R	A	K	A	K	K	P	D	N	W	E	I	V	G	K	P	Q	S	Q	E	A	Y	G	C	M	L	R	K	D	D	P	Q	F	K	K	L	M	D	D	T	I	A	Q	V	Q	T	S	G	E	A	E	K	W	F	D	K	W	F	K	N
Query Conservation
Alig confidence																								.																									.
Template Conservation																								.																									.
Template Sequence		K	Q	V	E	A	V	M	F	D	R	P	A	L	I	Y	Y	T	R	Q	N	P	N	.	L	N	L	E	V	T	E	I	R	V	S	L	E	P	Y	G	F	V	L	K	E	N	S	P	.	L	Q	K	T	I	N	V	E	M	L	N	L	L	Y	S	R	V	I	A	E	F	T	E	R	W	L	G	E
Template Known Secondary structure		T	S		S																	G	G	.	G						S			S											T	T		T	.	T														T	T
Template Predicted Secondary structure																								.																									.
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions