Job Description P37902 Confidence 95.20% Date Thu Jan 5 11:57:43 GMT 2012 Rank 57 Aligned Residues 189 % Identity 16% Template c3qslA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:putative exported protein; PDBTitle: structure of cae31940 from bordetella bronchiseptica rb50 Resolution 2.00 Å

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		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.							.	.	.	.	.
Predicted Secondary structure																													.																																										.	.	.	.	.	.
Query SS confidence																													.																																										.	.	.	.	.	.
Query Sequence		Q	D	Y	S	N	A	I	V	E	A	V	K	K	K	L	N	K	P	D	L	Q	V	K	L	I	P	I	.	T	S	Q	N	R	I	P	L	L	Q	N	G	T	F	D	F	E	C	G	S	T	T	N	N	V	E	R	Q	K	Q	A	A	F	S	D	T	I	F	V	V	G	.	.	.	.	.	.	T	R	L	L	T
Query Conservation																													.																																										.	.	.	.	.	.
Alig confidence																													.																																										.	.	.	.	.	.
Template Conservation
Template Sequence		I	Y	Y	L	P	L	T	I	A	E	V	K	G	F	F	K	D	E	G	L	D	V	S	I	A	D	F	A	G	G	S	K	A	L	Q	A	V	V	G	G	S	A	D	V	V	S	G	A	F	E	H	T	L	S	L	Q	A	K	G	Q	F	Y	R	A	F	A	L	Q	G	R	A	P	X	I	G	V	G	V	S	K
Template Known Secondary structure		G	G	G									T	T					T	T									S	S										T	T	S		S						T									T	T									S	B	S	S									T
Template Predicted Secondary structure
Template SS confidence
		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.				180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.
Predicted Secondary structure																						.																					.	.	.
Query SS confidence																						.																					.	.	.
Query Sequence		K	K	G	G	D	I	K	D	F	A	N	L	K	D	K	A	V	V	V	T	.	S	G	T	T	S	E	V	L	L	N	K	L	N	E	E	Q	K	M	N	M	.	.	.	R	I	I	S	A	K	D	H	G	D	S	F	R	T	L	E	S	G	R	A	V	A	F	M	M	D	D	A	L	L	A	G	E	R	A	K
Query Conservation																						.																					.	.	.
Alig confidence																						.																					.	.	.
Template Conservation
Template Sequence		K	N	L	P	G	Y	K	G	P	A	D	L	K	G	R	K	I	G	V	T	A	P	G	S	S	T	N	X	V	V	N	F	F	L	A	K	H	G	L	K	A	S	D	V	S	F	I	G	V	G	A	G	A	G	A	V	T	A	L	R	S	G	Q	I	D	A	I	S	N	T	D	P	V	V	S	X	L	E	T	S
Template Known Secondary structure		T	T		T	T			S	G	G	G	G	T	T						S	S	T	T	S													T	T			G	G	G	S							S	S										T	S		S						T	T								T
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		216	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.								.	.	.	.	.	.	.	.	240					.	.	.	.	.	.	.	.	.	250	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.	.	.										.	.	.	.
Query SS confidence																		.	.	.	.	.	.	.										.	.	.	.
Query Sequence		A	K	K	P	D	N	W	E	I	V	G	K	P	Q	S	Q	.	.	.	.	.	.	.	E	A	Y	G	C	M	L	R	K	.	.	.	.	D	D	P	Q	F	K	K	L	M	D	D	T	I	A	Q
Query Conservation																		.	.	.	.	.	.	.										.	.	.	.
Alig confidence																		.	.	.	.	.	.	.										.	.	.	.
Template Conservation
Template Sequence		G	D	I	Q	I	I	V	D	T	R	T	L	K	D	T	K	E	I	F	G	G	N	X	P	A	G	C	L	Y	A	P	Q	A	F	V	D	A	N	P	N	T	A	Q	A	L	T	N	A	I	V	R
Template Known Secondary structure		T									S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions