Job Description P37902 Confidence 100.00% Date Thu Jan 5 11:57:43 GMT 2012 Rank 15 Aligned Residues 228 % Identity 15% Template c3delC_ PDB info PDB header:protein binding, transport protein Chain: C: PDB Molecule:arginine binding protein; PDBTitle: the structure of ct381, the arginine binding protein from the2 periplasm chlamydia trachomatis Resolution 1.92 Å

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		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	V	I	V	V	G	H	R	E	S	S	V	P	F	S	Y	Y	D	N	Q	Q	K	V	V	G	Y	S	Q	D	Y	S	N	A	I	V	E	A	V	K	K	K	L	N	K	P	D	L	Q	V	K	L	I	P	I	T	S	Q	N	R	I	P	L	L	Q	N	G	T	F	D	F	E	C	G	S	T	T	N	N	V	E
Query Conservation
Alig confidence																																									.	.	.	.	.	.	.
Template Conservation																																									.	.	.	.	.	.	.
Template Sequence		E	K	F	I	V	G	T	N	A	T	Y	P	P	F	E	F	V	D	K	R	G	E	V	V	G	F	D	I	D	L	A	R	E	I	S	N	K	L	G	.	.	.	.	.	.	.	K	T	L	D	V	R	E	F	S	F	D	A	L	I	L	N	L	K	Q	H	R	I	D	A	V	I	T	G	M	S	I	T	P	S
Template Known Secondary structure										S		B	T	T	T	B				T	T	S				S														T	.	.	.	.	.	.	.										G	G	G							T	T	S	S	S				S	S	B	B
Template Predicted Secondary structure																																									.	.	.	.	.	.	.
Template SS confidence
		34	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.								.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Q	K	Q	A	A	F	S	D	T	I	F	V	V	G	T	R	L	L	T	K	K	G	G	D	I	K	D	F	A	N	L	K	D	K	A	V	V	V	T	S	G	T	T	S	E	V	L	L	N	K	L	N	E	E	Q	K	M	N	M	R	I	I	S	A	K	D	H	G	D	S	F	R	T	L	E	S	G	R	A
Query Conservation
Alig confidence																																																											.	.	.	.
Template Conservation																																																											.	.	.	.
Template Sequence		R	L	K	E	I	L	M	I	P	Y	Y	G	E	E	I	K	H	L	V	L	V	F	K	G	E	N	K	H	P	L	P	L	T	Q	Y	R	S	V	A	V	Q	T	G	T	Y	Q	E	A	Y	L	Q	S	L	S	E	V	H	.	.	.	.	I	R	S	F	D	S	T	L	E	V	L	M	E	V	M	H	G	K	S
Template Known Secondary structure				T	T	S											S								S			S					G	G	G	S	S						T	T	S									S	T	T			.	.	.	.					S	S										T	T	S	S
Template Predicted Secondary structure																																																											.	.	.	.
Template SS confidence
		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.					.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.		.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.
Query SS confidence																									.
Query Sequence		V	A	F	M	M	D	D	A	L	L	A	G	E	R	A	K	A	K	K	P	D	N	W	.	E	I	V	G	K	P	Q	S	Q	E	A	Y	G	C	M	L	R	K	D	D	P	Q	F	K	K	L	M	D	D	T	I	A	Q	V	Q	T	S	G	E	A	E	K	W	F	D	K	W	F	K	N	P	I	P	P	K	N
Query Conservation																									.
Alig confidence																									.
Template Conservation
Template Sequence		P	V	A	V	L	E	P	S	I	A	Q	V	V	L	K	D	F	P	A	L	S	T	A	T	I	D	L	P	E	D	Q	W	V	L	G	Y	G	I	G	V	A	S	D	R	P	A	L	A	L	K	I	E	A	A	V	Q	E	I	R	K	E	G	V	L	A	E	L	E	Q	K	W	G	L	N	N	L	E	H	H	H
Template Known Secondary structure		S													G	G	G		T	T										G	G	G											T	T																		T	T										T	G	G	G		S	S	T	T
Template Predicted Secondary structure
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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