Job Description P37902 Confidence 99.95% Date Thu Jan 5 11:57:43 GMT 2012 Rank 32 Aligned Residues 214 % Identity 21% Template c2pyyB_ PDB info PDB header:transport protein Chain: B: PDB Molecule:ionotropic glutamate receptor bacterial homologue; PDBTitle: crystal structure of the glur0 ligand-binding core from nostoc2 punctiforme in complex with (l)-glutamate Resolution 2.10 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		42	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	V	V	G	H	R	E	S	S	V	P	F	S	Y	Y	D	N	Q	Q	K	V	V	G	Y	S	Q	D	Y	S	N	A	I	V	E	A	V	K	K	K	L	N	K	P	D	L	Q	V	K	L	I	P	I	T	S	Q	N	R	I	P	L	L	Q	N	G	T	F	D	F	E	C	G	S	T	T	N	N	V	E	R	Q
Query Conservation
Alig confidence								.								.	.	.	.																				.	.	.	.	.	.	.
Template Conservation								.								.	.	.	.																				.	.	.	.	.	.	.
Template Sequence		L	L	V	A	T	R	.	V	I	P	P	F	V	L	.	.	.	.	S	N	L	S	G	F	S	I	D	L	W	R	S	I	A	T	Q	I	G	.	.	.	.	.	.	.	I	E	S	K	L	I	E	Y	S	S	V	P	E	L	I	S	A	I	K	D	N	K	V	N	L	G	I	A	A	I	S	I	T	A	E	R
Template Known Secondary structure								.		B	T	T	T	B	B	.	.	.	.				B	S														T	.	.	.	.	.	.	.									S	S										T	T	S	S	S				S	S		B
Template Predicted Secondary structure								.								.	.	.	.																				.	.	.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10		.	.	.	.	.	.	.					.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.								.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.
		122	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	A	A	F	S	D	T	I	F	V	V	G	T	R	L	L	T	K	K	G	G	D	I	K	D	F	A	N	L	K	D	K	A	V	V	V	T	S	G	T	T	S	E	V	L	L	N	K	L	N	E	E	Q	K	M	N	M	R	I	I	S	A	K	D	H	G	D	S	F	R	T	L	E	S	G	R	A	V	A
Query Conservation
Alig confidence																																																				.	.	.	.	.	.
Template Conservation																																																				.	.	.	.	.	.
Template Sequence		E	Q	N	F	D	F	S	L	P	I	F	A	S	G	L	Q	I	M	V	R	N	G	D	I	R	S	I	D	D	L	P	G	K	V	V	A	T	T	A	G	S	T	A	A	T	Y	L	R	E	H	.	.	.	.	.	.	H	I	S	V	L	E	V	P	K	I	E	E	A	Y	K	A	L	Q	T	K	K	A	D	A
Template Known Secondary structure					S				S		S																S	G	G	G		T	T	S						T	T	S									T	.	.	.	.	.	.	T							S	S										T	T	S	S	S
Template Predicted Secondary structure																																																				.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.							.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		202	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	M	M	D	D	A	L	L	A	G	E	R	A	K	A	K	K	P	D	N	W	E	I	V	G	K	P	Q	S	Q	E	A	Y	G	C	M	L	R	K	D	D	P	Q	F	K	K	L	M	D	D	T	I	A	Q	V	Q	T	S	G	E	A	E	K	W	F	D	K	W	F	K	N	P	I	P
Query Conservation
Alig confidence																			.																						.
Template Conservation																			.																						.
Template Sequence		V	V	F	D	A	P	V	L	L	F	Y	A	A	N	E	G	K	.	G	K	V	E	I	V	G	S	I	L	R	E	E	S	Y	G	I	I	L	P	N	.	N	S	P	Y	R	K	P	I	N	Q	A	L	L	N	L	K	E	N	G	T	Y	Q	S	L	Y	D	K	W	F	D	P	K	N	S
Template Known Secondary structure														T	T	T	T	T	.	T	T																			T	.	T		T	T														T	S										S		G	G	G
Template Predicted Secondary structure																			.																						.
Template SS confidence
		153	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions