Job Description P0AA60 Confidence 2.23% Date Thu Jan 5 11:12:01 GMT 2012 Rank 27 Aligned Residues 145 % Identity 17% Template d1iwga7 SCOP info Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Multidrug efflux transporter AcrB transmembrane domain Resolution 3.50

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.						.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure																																						.	.	.	.	.
Query SS confidence																																						.	.	.	.	.
Query Sequence		A	V	I	Q	D	I	I	A	A	L	W	Q	H	D	F	A	A	L	A	D	P	H	I	V	S	V	V	Y	F	V	M	F	A	T	L	F	.	.	.	.	.	L	E	N	G	L	L	P	A	S	F	L	P	G	D	S	L	L	I	L	A	G	A	L	I	A	Q	G	V	M	D	F	L	P	T	I	A	I	L	T
Query Conservation																																						.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.												.	.	.	.	.
Template Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	S	I	H	E	V	V	K	T	L	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	A	I	I	L	V	F	L	V	M	Y	L	F	L	Q	N	F	R	A	T	L	I	P	T	I	A	V	P	V	V	L	L	G	T	F	A	V	L	A	A	F	G	F	S	I	N	T	L	T	M	F	G	M	V	L
Template Known Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.												T	T				T	T	T	T	T																			T	T	T			S
Template Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		335	.	.	.	.	340	.	.	.	.	.															.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	A	S	L	G	C	W	L	S	Y	I	Q	G	R	W	L	G	N	T	K	T	V	K	G	W	L	A	Q	L	P	A	K	Y	H	Q	R	A	T	C	M	F	D	R	H	G	L	L	A	L	L	A	G	R	F	L	A	F	V	R	T	L	L	P	T	M	A	G	I	S	G	L	P	N	R	R	F	Q	F	F
Query Conservation
Alig confidence																		.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.
Template Sequence		A	I	G	L	L	V	D	D	A	I	V	V	V	E	N	V	.	.	.	.	.	.	.	E	R	V	M	A	E	E	G	L	P	P	K	E	A	T	R	K	S	M	G	Q	I	Q	G	A	L	V	G	I	A	M	V	L	S	A	V	F	V	P	M	A	F	F	G	G	S	T	G	A	I	Y	R	Q	F	S	I	T
Template Known Secondary structure																		.	.	.	.	.	.	.							T	S			S							G	G	G	T																	T	T	T	T				T	T	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.
Template SS confidence
		401	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.								.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
		157	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	W	L	S	G	L	L	W	V	S	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	V	S	A	M	A	L	S	V	L	V
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		474	.	.	.	.	.	480	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions