Return to main results Retrieve Phyre Job Id

Job DescriptionP0AA60
Confidence0.88%DateThu Jan 5 11:12:01 GMT 2012
Rank93Aligned Residues11
% Identity27%Templatec3pvdA_
PDB info PDB header:viral proteinChain: A: PDB Molecule:capsid; PDBTitle: crystal structure of p domain dimer of norovirus va207 complexed with2 3'-sialyl-lewis x tetrasaccharide
Resolution1.90 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   44.....50....
Predicted Secondary structure 





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Query Sequence  PASFLPGDSLL
Query Conservation      


   
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Template Conservation 
 
  


 

Template Sequence  VSPLFPGEQIL
Template Known Secondary structure  B


STT
Template Predicted Secondary structure 






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   419420.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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