 |
Job Description | P0ACS9 | Confidence | 45.86% | Date | Thu Jan 5 11:18:56 GMT 2012 |
Rank | 443 | Aligned Residues | 55 |
% Identity | 24% | Template | d1lfup_ |
SCOP info | DNA/RNA-binding 3-helical bundle
| Homeodomain-like
| Homeodomain
|
Resolution | UNK |
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | |
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | R | K | T | K | Q | E | A | Q | E | T | R | Q | H | I | L | D | V | A | L | R | L | F | S | Q | Q | G | V | . |
S | S | T | S | L | G | E | I | A | K | A | A | G | V | T | R | G | A | I | Y | W | H | F | K | D | K |
Query Conservation |   |
|
|
|   |   |   |   |   |   |   |   |
|
|   |   |
|
|   |
|
|   |   |
|   |   |   |   |
|   | . |   |   |   |
|
|   |   |
|
|   |   |
|
|
|
|   |   |
|   |
|   |   |
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |
|   |   |   |   |   |
|
|
|
|   |   |   |   |   |   |   |
|
|   |   |   |
|
|   |   |   |
|
|   |   |
|
|   |
|   |
Template Sequence |   |
M | A | R | R | K | R | R | N | F | N | K | Q | A | T | E | I | L | N | E | Y | F | Y | S | H | L | S | N | P | Y | P | S | E | E | A | K | E | E | L | A | K | K | S | G | I | T | V | S | Q | V | S | N | W | F | G | N | K |
Template Known Secondary structure |   |
|
| S |
| S | S | S | S | S |
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | T | T | S |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  | S | S |
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
0 | . | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|