Return to main results Retrieve Phyre Job Id

Job DescriptionP0ACS9
Confidence55.96%DateThu Jan 5 11:18:56 GMT 2012
Rank384Aligned Residues33
% Identity12%Templated1d5ya2
SCOP infoDNA/RNA-binding 3-helical bundle Homeodomain-like AraC type transcriptional activator
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   17..20.........30.........40... ......50..
Predicted Secondary structure 







.



Query SS confidence 


























.








Query Sequence  LDVALRLFSQQGVSSTSLGEIAKAAGV. TRGAIYWHF
Query Conservation 
 

  
    
    

  

  


.
  
 
  
Alig confidence 










...












.








Template Conservation 
  
  

   ...  

  

   

     
 
 
Template Sequence  LSKSAVALRLT. . . ARPILDIALQYRFDSQQTFTRAF
Template Known Secondary structure 
...


TT
S
Template Predicted Secondary structure 

...






Template SS confidence 




































   5960......... 70.........80.........90..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions