Job Description P0ACS9 Confidence 99.82% Date Thu Jan 5 11:18:56 GMT 2012 Rank 51 Aligned Residues 197 % Identity 18% Template c3npiB_ PDB info PDB header:gene regulation Chain: B: PDB Molecule:tetr family regulatory protein; PDBTitle: crystal structure of a tetr family regulatory protein (dip1788) from2 corynebacterium diphtheriae at 2.96 a resolution Resolution 2.96 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K	F	P	G	D	P	L	S	V	L	R	E
Query Conservation
Alig confidence																																																																								.
Template Conservation																																																																								.
Template Sequence		S	T	D	T	V	L	D	I	A	L	S	L	F	S	E	L	G	F	S	D	A	K	L	E	A	I	A	K	K	S	G	X	S	K	R	X	I	H	Y	H	F	G	D	K	R	G	L	Y	I	C	C	L	E	E	A	V	R	R	L	R	P	T	A	E	E	X	Y	L	A	S	.	A	V	P	V	E	G	V	R	T
Template Known Secondary structure																																												S																	S			T	T	T	T			S		.
Template Predicted Secondary structure																																																																								.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.		.	.	90	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	K	M	L	P	A	D	L	M	T	R	R	A	A	I	I	M	R	G	Y	I
Query Conservation
Alig confidence																																											.	.	.	.
Template Conservation																																											.	.	.	.
Template Sequence		I	V	E	A	V	F	H	R	Y	V	Q	H	P	E	A	V	R	X	L	Q	X	E	N	L	H	H	Y	G	K	V	A	E	A	S	P	L	S	D	Q	S	A	.	.	.	.	I	T	L	Q	L	D	R	L	L	X	L	G	Q	D	A	G	A	F	R	P	G	I	S	A	Q	D	V	F	T	L	I	A	S	I	A
Template Known Secondary structure																										S		T	T			T	T	S			S	S					.	.	.	.															T	T	S	S		S	S
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.					.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.
		172	.	.	.	.						.	.	.	180	.	.	.	.	.	.	.	.				.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure							.	.	.	.	.													.	.	.
Query SS confidence							.	.	.	.	.													.	.	.
Query Sequence		S	G	L	M	E	.	.	.	.	.	N	W	L	F	A	P	Q	S	F	D	L	K	.	.	.	K	E	A	R	D	Y	V	A	I	L	L	E	M	Y	L	L	C	P	T	L	R	N	P	A	T
Query Conservation							.	.	.	.	.													.	.	.
Alig confidence							.	.	.	.	.													.	.	.
Template Conservation
Template Sequence		V	F	R	I	N	S	R	S	T	T	L	N	L	Y	G	I	D	X	X	N	G	D	N	T	D	G	X	R	R	X	A	V	D	T	V	L	A	F	L	T	S	N	L	K	S	A	D	E	D	S
Template Known Secondary structure							T												T	T	S																				T			S				S		S
Template Predicted Secondary structure
Template SS confidence
		173	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions