Job Description P0ACS9 Confidence 99.74% Date Thu Jan 5 11:18:56 GMT 2012 Rank 96 Aligned Residues 186 % Identity 17% Template c3kkdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: structure of a putative tetr transcriptional regulator (pa3699) from2 pseudomonas aeruginosa pa01 Resolution 2.10 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.											.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.
Query Sequence		E	T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	.	.	.	.	.	.	.	.	.	.	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.
Alig confidence																																																					.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		Q	R	R	Q	A	I	L	D	A	A	X	R	L	I	V	R	D	G	V	R	A	V	R	H	R	A	V	A	A	E	A	Q	V	P	L	S	A	T	D	I	D	D	L	I	T	D	T	F	A	L	F	V	E	R	N	A	E	A	L	S	A	F	W	S	S	V	E	G	D	L	Q	E	X	A	A	V	L	A	D	D
Template Known Secondary structure																				G	G	G											T	S		T	T	T
Template Predicted Secondary structure
Template SS confidence
		35	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	G	D	P	L	S	V	L	R	E	I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	K	M	L	P	A	D	L	M	T
Query Conservation
Alig confidence																																																																					.	.	.	.	.	.	.
Template Conservation																																																																					.	.	.	.	.	.	.
Template Sequence		P	G	A	R	G	S	L	V	E	R	I	V	E	L	A	V	Q	Y	V	Q	V	Q	L	T	E	R	R	E	H	L	L	A	E	Q	A	F	R	Q	E	A	L	L	N	P	R	L	R	E	L	A	D	A	H	Q	R	I	L	S	L	G	A	V	H	F	F	Q	V	.	.	.	.	.	.	.	L	G	S	G	Q	P
Template Known Secondary structure		G	G	G																						T	T															T	T																										.	.	.	.	.	.	.	T	T		S
Template Predicted Secondary structure																																																																					.	.	.	.	.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.								.	.	.	190	.	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	A	A	I	I	M	R	G	Y	I	S	G	L	M	E	N	W	L	F	A	P	Q	S	F	D	L	K	K	E	A	R	D	Y	V	A	I	L	L	E	M	Y	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	D	A	K	V	L	T	S	I	I	L	Q	X	E	Y	Q	G	L	V	D	G	V	E	Q	L	A	V	D	E	X	R	A	I	L	R	R	Y	L	N	L	V	X
Template Known Secondary structure																								G	G	G																		T
Template Predicted Secondary structure
Template SS confidence
		193	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions