Job Description P0ACS9 Confidence 99.73% Date Thu Jan 5 11:18:56 GMT 2012 Rank 99 Aligned Residues 169 % Identity 16% Template c2yvhA_ PDB info PDB header:transcription/dna Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of the operator-binding form of the multi-drug2 binding transcriptional repressor cgmr Resolution 2.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K	F	P	G	D	P	L	S	V	L	R	E
Query Conservation
Alig confidence																																																																										.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		K	K	E	X	I	L	R	T	A	I	D	Y	I	G	E	Y	S	L	E	T	L	S	Y	D	S	L	A	E	A	T	G	L	S	K	S	G	L	I	Y	H	F	P	S	R	H	A	L	L	L	G	X	H	E	L	L	A	D	D	W	D	K	E	L	R	D	I	T	R	D	P	E	D	.	.	.	.	.	P	L	E
Template Known Secondary structure																	S		S	T	T											S	S									S	S	S																			T	T	T	S	S		S		T	T	S	.	.	.	.	.
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.						.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	K	M	L	P	A	D	L	M	T	R	R	A	A	I	I	M	R	G	Y	I
Query Conservation
Alig confidence																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	L	R	A	V	V	V	T	L	A	E	N	V	S	R	P	E	L	L	L	L	I	D	A	P	S	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	D	F	L	N	A	W	R	T	V	N	H	Q	W	I	P	D	T	D	D	L	E	N	D	A	H	K	R	A	V	Y	L	V	Q	L	A	A
Template Known Secondary structure													S												G	G	G		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.							T					T	T	T	S					S		S	S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.																	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	L	M	E	N	W	L	F	A	P	Q	S	F	D	L	K	K	E	A	R	D	Y	V	A	I	L	L	E	M	Y
Query Conservation
Alig confidence																		.
Template Conservation																		.
Template Sequence		D	G	L	F	V	H	D	Y	I	H	D	D	V	L	S	K	.	S	K	R	Q	A	X	L	E	T	I	L	E	L	I
Template Known Secondary structure											S	S						.													T
Template Predicted Secondary structure																		.
Template SS confidence
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.	.	170	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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