Job Description P0ACS9 Confidence 99.81% Date Thu Jan 5 11:18:56 GMT 2012 Rank 55 Aligned Residues 171 % Identity 16% Template c2rekA_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative tetr-family transcriptional regulator; PDBTitle: crystal structure of tetr-family transcriptional regulator Resolution 1.86 Å

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		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	A	Q	E	T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K	F	P	G	D	P	L	S
Query Conservation
Alig confidence																								.																																																			.	.
Template Conservation																								.																																																			.	.
Template Sequence		D	A	R	R	N	Y	D	R	I	I	E	A	A	A	A	E	V	A	R	H	G	A	.	D	A	S	L	E	E	I	A	R	R	A	G	V	G	S	A	T	L	H	R	H	F	P	S	R	W	G	L	L	Q	A	V	F	Q	E	R	V	A	Q	L	C	D	E	A	R	S	L	A	A	E	.	.	H	P	P	A	T
Template Known Secondary structure																						G	G	.	G											T											S	S																											.	.	S
Template Predicted Secondary structure																								.																																																			.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.		.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.			.	.	.	.	.
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	R	E	I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	K	M	L	P	A	D	L	M	T	R	R	A	A	I	I	M
Query Conservation
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		A	L	T	R	W	L	T	S	L	A	V	F	G	A	V	T	R	G	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	R	S	L	A	A	L	D	S	R	C	E	Q	L	L	T	E	A	G	A	D	L	L	A	R	A	Q	E	D	G	T	V	R	D	D	V	T	A	L	E	L	L	S	L	A
Template Known Secondary structure																					G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G																										T	T	S	S		T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.																	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	G	Y	I	S	G	L	M	E	N	W	L	F	A	P	Q	S	F	D	L	K	K	E	A	R	D	Y	V	A	I	L	L	E	M	Y	L	L
Query Conservation
Alig confidence					.	.	.	.	.	.	.
Template Conservation					.	.	.	.	.	.	.
Template Sequence		N	A	V	.	.	.	.	.	.	.	S	L	A	A	E	H	T	P	D	A	A	H	H	A	T	R	L	M	G	I	A	L	G	G	L	G	A
Template Known Secondary structure					.	.	.	.	.	.	.					T	T	S	T	T																S
Template Predicted Secondary structure					.	.	.	.	.	.	.
Template SS confidence
		163	.	.								.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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