Job Description P0ACS9 Confidence 99.79% Date Thu Jan 5 11:18:56 GMT 2012 Rank 71 Aligned Residues 191 % Identity 17% Template c2oi8A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative regulatory protein sco4313; PDBTitle: crystal structure of putative regulatory protein sco4313 Resolution 2.50 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	T	K	Q	E	A	Q	E	T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K	F	P	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	R	E	R	Y	R	T	Q	V	R	A	E	I	K	D	H	A	W	E	Q	I	A	T	A	G	A	S	A	L	S	L	N	A	I	A	K	R	X	G	X	S	G	P	A	L	Y	R	Y	F	D	G	R	D	E	L	I	T	E	L	I	R	D	A	Y	R	S	Q	A	D	S	L	R	A	A	A	A	S	G	A	D
Template Known Secondary structure			S	S																							T	T	S										T	T								T	T		S	S																										T	T
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.							.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.
Query Sequence		D	P	L	S	V	L	R	E	I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	.	.	.	.	.	.	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	K	M	L	P	A	D
Query Conservation																														.	.	.	.	.	.
Alig confidence		.	.	.	.	.																								.	.	.	.	.	.
Template Conservation		.	.	.	.	.
Template Sequence		.	.	.	.	.	L	A	G	L	A	H	A	L	R	A	W	A	L	D	D	P	Q	R	Y	F	L	I	F	G	T	P	V	P	G	Y	R	A	P	D	D	I	T	E	I	A	A	E	T	X	A	V	I	V	D	A	C	A	A	G	T	D	G	A	F	D	A	H	L	D	T	H	R	Q	W	A	D	R	P	A	P
Template Known Secondary structure		.	.	.	.	.																								S	S			T	T					G	G	G	T	T	T	T																	S									S
Template Predicted Secondary structure		.	.	.	.	.
Template SS confidence
							89	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.
Query SS confidence																									.	.	.
Query Sequence		L	M	T	R	R	A	A	I	I	M	R	G	Y	I	S	G	L	M	E	N	W	L	F	.	.	.	A	P	Q	S	F	D	L	K	K	E	A	R	D	Y	V	A	I	L	L
Query Conservation																									.	.	.
Alig confidence																									.	.	.
Template Conservation
Template Sequence		S	S	A	L	H	R	A	L	S	F	W	S	R	L	H	G	V	L	S	L	E	L	A	G	Q	F	T	G	X	G	F	D	S	A	L	L	F	E	A	E	L	K	D	L	L
Template Known Secondary structure																								T	T	T	T	T	T	S		S														S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions