Job Description P0ACS9 Confidence 99.82% Date Thu Jan 5 11:18:56 GMT 2012 Rank 50 Aligned Residues 187 % Identity 14% Template c2o7tA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: crystal structure of a tetr family transcriptional regulator2 (ncgl1578, cgl1640) from corynebacterium glutamicum at 2.10 a3 resolution Resolution 2.10 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Q	E	A	Q	E	T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K	F	P	G	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	A	D	A	L	K	R	R	E	H	I	I	T	T	T	C	N	L	Y	R	T	H	H	H	D	S	L	T	X	E	N	I	A	E	Q	A	G	V	G	V	A	T	L	Y	R	N	F	P	D	R	F	T	L	D	X	A	C	A	Q	Y	L	F	N	V	V	I	S	L	Q	L	Q	A	I	S	T	F	P	T	D	P
Template Known Secondary structure																							S		G	G	G											T											S	S																											G	G	G
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	S	V	L	R	E	I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	K	M	L	P	A	D	L	M	T	R	R	A	A	I
Query Conservation
Alig confidence																		.	.	.	.	.	.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.
Template Sequence		E	G	V	W	T	S	F	N	Q	L	L	F	D	R	G	L	.	.	.	.	.	.	.	.	.	.	G	S	L	V	P	A	L	A	P	E	S	L	D	D	L	P	D	E	V	S	A	L	R	R	T	T	E	K	N	T	T	T	L	I	N	L	A	K	Q	H	G	L	V	H	H	D	I	A	P	G	T	Y	I	V
Template Known Secondary structure															T	T		.	.	.	.	.	.	.	.	.	.										S	S	G	G	G	S																									T	T	S	S		T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.											.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	M	R	G	Y	I	S	G	L	M	E	N	W	L	F	A	P	Q	S	F	D	L	K	K	E	A	R	D	Y	V	A	I	L	L	E	M	Y	L	L	C	P	T
Query Conservation
Alig confidence						.	.	.	.	.
Template Conservation						.	.	.	.	.
Template Sequence		G	L	I	T	.	.	.	.	.	I	S	R	P	P	I	T	A	L	A	T	I	S	E	N	S	H	K	A	L	L	G	L	Y	L	S	G	L	K	H	G	X	X
Template Known Secondary structure						.	.	.	.	.		T	S				G	G	G			S	S
Template Predicted Secondary structure						.	.	.	.	.
Template SS confidence
		152	.	.	.						.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions