Job Description P0ACS9 Confidence 99.75% Date Thu Jan 5 11:18:56 GMT 2012 Rank 93 Aligned Residues 174 % Identity 16% Template c2iu5A_ PDB info PDB header:transcription Chain: A: PDB Molecule:hth-type dhaklm operon transcriptional activator dhas; PDBTitle: dihydroxyacetone kinase operon activator dhas Resolution 1.6 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	R	K	T	K	Q	E	A	Q	E	T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K
Query Conservation
Alig confidence							.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.
Template Conservation							.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.
Template Sequence		M	E	K	S	I	.	.	.	.	.	I	T	Q	K	I	I	A	K	A	F	K	D	L	M	Q	S	N	A	Y	H	Q	I	S	V	S	D	I	M	Q	T	A	K	I	R	R	Q	T	F	Y	N	Y	F	Q	N	Q	E	E	L	L	S	W	I	F	E	N	D	F	A	E	L	.	.	.	.	.	.	.	.	.	I
Template Known Secondary structure				T	T	S	.	.	.	.	.																	S		G	G	G											T	S		G	G	G	G	G	G	T		S	S																	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.	.	.	.																																																													.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.						.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.										.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.		.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																									.
Query SS confidence																																																																									.
Query Sequence		F	P	G	D	P	L	S	V	L	R	E	I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	.	K	M	L	P	A	D	L	M
Query Conservation																																																																									.
Alig confidence																																	.	.	.	.	.	.	.	.	.	.	.	.																													.
Template Conservation																																	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	D	N	S	D	Y	Y	G	W	Q	N	E	L	L	L	L	L	R	Y	L	D	E	N	Q	I	F	Y	Q	K	I	F	.	.	.	.	.	.	.	.	.	.	.	.	V	I	D	K	N	F	E	H	F	F	L	I	Q	W	E	N	L	L	D	K	V	I	F	D	Q	E	K	K	S	D	Y	H	W	S	D	L	E
Template Known Secondary structure		T	S	S			S	S																T									.	.	.	.	.	.	.	.	.	.	.	.				T	T																								S
Template Predicted Secondary structure																																	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.													.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	R	A	A	I	I	M	R	G	Y	I	S	G	L	M	E	N	W	L	F	A	P	Q	S	F	D	L	K	K	E	A	R	D	Y	V	A	I	L	L	E	M	Y
Query Conservation
Alig confidence																										.	.
Template Conservation																										.	.
Template Sequence		K	S	F	I	C	R	Y	N	A	A	A	I	C	A	I	T	R	E	S	I	I	R	G	N	.	.	S	L	E	K	L	Y	S	Q	I	V	N	L	L	L	A	Q	I
Template Known Secondary structure																								T		.	.		S	G	G	G
Template Predicted Secondary structure																										.	.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.			.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions