Job Description P0ACS9 Confidence 99.85% Date Thu Jan 5 11:18:56 GMT 2012 Rank 31 Aligned Residues 188 % Identity 20% Template c2ibdB_ PDB info PDB header:structural genomics, unknown function Chain: B: PDB Molecule:possible transcriptional regulator; PDBTitle: crystal structure of probable transcriptional regulatory protein2 rha5900 Resolution 1.50 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K	F	P	G	D	P	L	S	V	L	R	E
Query Conservation
Alig confidence																																																																						.
Template Conservation																																																																						.
Template Sequence		R	R	T	E	L	L	D	I	A	A	T	L	F	A	E	R	G	L	R	A	T	T	V	R	D	I	A	D	A	A	G	I	L	S	G	S	L	Y	H	H	F	D	S	K	E	S	X	V	D	E	I	L	R	G	F	L	D	D	L	F	G	K	Y	R	E	I	V	A	.	S	G	L	D	S	R	A	T	L	E	A
Template Known Secondary structure																			S	T	T											T	S							T	T		S																											.	T	T
Template Predicted Secondary structure																																																																						.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.		.	.	.	.	.	.	.	90	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	K	M	L	P	A	D	L	M	T	R	R	A	A	I	I	M	R	G	Y	I
Query Conservation
Alig confidence																.	.	.	.
Template Conservation																.	.	.	.
Template Sequence		L	V	T	T	S	Y	E	A	I	D	A	S	H	S	.	.	.	.	A	V	A	I	Y	Q	D	E	V	K	H	L	V	A	N	E	R	F	T	Y	L	S	E	L	N	T	E	F	R	E	L	W	X	G	V	L	E	A	G	V	K	D	G	S	F	R	S	D	I	D	V	E	L	A	F	R	F	L	R	D	T	A
Template Known Secondary structure													S			.	.	.	.								T		G	G	G	T	T	S	G	G	G	T																							T	T	S	S		T	T	S													S
Template Predicted Secondary structure																.	.	.	.
Template SS confidence
		94	.	.	.	.	.	100	.	.	.	.	.	.	.					.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	L	M	E	N	W	L	F	A	P	Q	S	F	D	L	K	K	E	A	R	D	Y	V	A	I	L	L	E	M	Y	L	L	C
Query Conservation
Alig confidence				.
Template Conservation				.
Template Sequence		W	V	.	A	V	R	W	Y	R	P	G	G	S	V	T	V	D	T	V	A	K	Q	Y	L	S	I	V	L	D	G	L	A	S	P
Template Known Secondary structure		S	G	.	G	G	G	T			T	T	S	S	S																	S	S
Template Predicted Secondary structure				.
Template SS confidence
		170	.		.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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