Job Description P0ACS9 Confidence 99.80% Date Thu Jan 5 11:18:56 GMT 2012 Rank 61 Aligned Residues 184 % Identity 16% Template c2hkuB_ PDB info PDB header:transcription regulator Chain: B: PDB Molecule:a putative transcriptional regulator; PDBTitle: structural genomics, the crystal structure of a putative2 transcriptional regulator from rhodococcus sp. rha1 Resolution 2.00 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K	F	P	G	D	P	L	S	V	L	R	E
Query Conservation
Alig confidence																				.																																																					.
Template Conservation																				.																																																					.
Template Sequence		T	R	D	A	L	F	T	A	A	T	E	L	F	L	E	H	G	E	.	G	V	P	I	T	Q	I	C	A	A	A	G	A	H	P	N	Q	V	T	Y	Y	Y	G	S	K	E	R	L	F	V	E	V	A	C	A	A	V	L	R	A	G	K	R	A	E	D	D	A	A	T	A	E	.	T	V	G	D	Y	T	E	K
Template Known Secondary structure																			T	.	T	S									T	T			T								S	S																									T	T		S	.	B
Template Predicted Secondary structure																				.																																																					.
Template SS confidence
		19	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.		.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.		.	90	.	.	.	.	.	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	K	M	L	P	A	D	L	M	T	R	R	A	A	I	I	M	R	G	Y	I
Query Conservation
Alig confidence																						.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.
Template Sequence		L	V	G	S	L	L	G	P	G	A	P	S	V	E	L	F	T	S	A	X	.	.	.	.	.	.	L	X	T	G	R	R	S	E	L	R	D	L	I	T	D	T	L	R	T	L	H	S	S	G	E	V	A	L	I	R	T	L	X	R	T	G	W	Q	L	R	A	G	I	D	V	E	S	K	A	F	W	S	A	I
Template Known Secondary structure								T	T	T												.	.	.	.	.	.				T	T																												G	G	G	T				S	S
Template Predicted Secondary structure																						.	.	.	.	.	.
Template SS confidence
		97	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.							.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170
		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	G	L	M	E	N	W	L	F	A	P	Q	S	F	D	L	K	K	E	A	R	D	Y	V	A	I	L	L	E	M	Y	L	L	C	P	T	L	R	N	P	A
Query Conservation
Alig confidence												.	.	.	.	.	.	.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.
Template Sequence		F	G	L	V	I	Q	K	T	A	S	.	.	.	.	.	.	.	.	.	L	E	E	A	V	A	V	I	F	A	N	L	Q	I	P	E	T	V	R	N	T	S
Template Known Secondary structure									T			.	.	.	.	.	.	.	.	.												T	T								S	B
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.
Template SS confidence
		171	.	.	.	.	.	.	.	.	180										.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions