Job Description P0ACS9 Confidence 99.74% Date Thu Jan 5 11:18:56 GMT 2012 Rank 94 Aligned Residues 179 % Identity 18% Template c2fd5A_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator; PDBTitle: the crystal structure of a transcriptional regulator from pseudomonas2 aeruginosa pao1 Resolution 1.70 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	A	R	K	T	K	Q	E	A	Q	E	T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K
Query Conservation
Alig confidence							.	.	.	.																																																																			.	.
Template Conservation							.	.	.	.																																																																			.	.
Template Sequence		M	S	D	K	K	.	.	.	.	T	Q	T	R	A	R	I	L	G	A	A	T	Q	A	L	L	E	R	G	A	V	E	P	S	V	G	E	V	M	G	A	A	G	L	T	V	G	G	F	Y	A	H	F	Q	S	K	D	A	L	M	L	E	A	F	E	Q	L	L	G	K	R	R	E	L	L	G	.	.	E	L	D
Template Known Secondary structure							.	.	.	.																			T	T	T	S										T	T			G	G	G	G	G	G	T		S																							.	.	T	S
Template Predicted Secondary structure							.	.	.	.																																																																			.	.
Template SS confidence
		1	.	.	.	.					.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.			.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure
Query SS confidence
Query Sequence		F	P	G	D	P	L	S	V	L	R	E	I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	K	M	L	P	A	D	L	M	T
Query Conservation
Alig confidence																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	G	L	S	G	K	E	R	R	A	L	A	A	A	F	Y	L	S	R	K	H	R	D	A	Q	V	D	A	G	C	P	L	P	A	T	L	A	E	V	A	R	L	P	E	G	F	R	E	V	L	S	R	H	V	E	I	M	V	T	S	L	.	.	.	.	.	.	.	.	.	.	.	.	.	A	E	S	P	E	E
Template Known Secondary structure		T	T	S														S						T	T		S	S	S			S					G	G	G	G	G	G	S																				.	.	.	.	.	.	.	.	.	.	.	.	.		S	S	G	G	G
Template Predicted Secondary structure																																																															.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.														.	.	.	.	140	.
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	A	A	I	I	M	R	G	Y	I	S	G	L	M	E	N	W	L	F	A	P	Q	S	F	D	L	K	K	E	A	R	D	Y	V	A	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	D	V	A	L	A	D	L	V	L	M	I	G	G	L	A	L	A	R	A	L	G	P	G	E	L	S	D	R	V	L	R	A	A	K	Q	A	V
Template Known Secondary structure																								S	S													T
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions