Job Description P0ACS9 Confidence 99.69% Date Thu Jan 5 11:18:56 GMT 2012 Rank 113 Aligned Residues 168 % Identity 14% Template c1bjzA_ PDB info PDB header:transcription regulation Chain: A: PDB Molecule:tetracycline repressor; PDBTitle: tetracycline chelated mg2+-ion initiates helix unwinding for tet2 repressor induction Resolution 2.20 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	R	Q	H	I	L	D	V	A	L	R	L	F	S	Q	Q	G	V	S	S	T	S	L	G	E	I	A	K	A	A	G	V	T	R	G	A	I	Y	W	H	F	K	D	K	S	D	L	F	S	E	I	W	E	L	S	E	S	N	I	G	E	L	E	L	E	Y	Q	A	K	F	P	G	D	P	L	S	V	L	R	E
Query Conservation
Alig confidence																																																															.	.	.
Template Conservation																																																															.	.	.
Template Sequence		N	R	E	S	V	I	D	A	A	L	E	L	L	N	E	T	G	I	D	G	L	T	T	R	K	L	A	Q	K	L	G	I	E	Q	P	T	L	Y	W	H	V	K	N	K	R	A	L	L	D	A	L	A	V	E	I	L	A	R	H	H	D	.	.	.	Y	S	L	P	A	A	G	E	S	W	Q	S	F	L	R	N
Template Known Secondary structure		S																														T	S																													T	.	.	.	T	S	S			T	T
Template Predicted Secondary structure																																																															.	.	.
Template SS confidence
		5	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.				.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	I	H	V	L	E	S	T	V	T	E	E	R	R	R	L	L	M	E	I	I	F	H	K	C	E	F	V	G	E	M	A	V	V	Q	Q	A	Q	R	N	L	C	L	E	S	Y	D	R	I	E	Q	T	L	K	H	C	I	E	A	K	M	L	P	A	D	L	M	T	R	R	A	A	I	I	M	R	G	Y	I
Query Conservation
Alig confidence																						.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																						.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	A	M	S	F	R	R	A	L	L	R	Y	R	D	G	A	K	V	H	L	.	.	.	.	.	.	.	G	T	R	P	D	E	K	Q	Y	D	T	V	E	T	Q	L	R	F	M	T	E	.	.	.	.	.	.	.	.	.	.	.	.	.	N	G	F	S	L	R	D	G	L	Y	A	I	S	A	V	S	H	F	T
Template Known Secondary structure												T	S	T	T							.	.	.	.	.	.	.	T	S																				.	.	.	.	.	.	.	.	.	.	.	.	.	T	T
Template Predicted Secondary structure																						.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.								.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.														.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.
		172	.	.	.	.	.	.	.	180	.	.	.	.													.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	G	L	M	E	N	W	L	F	A	P	Q	S	.	.	.	.	.	.	.	.	.	.	.	.	F	D	L	K	K	E	A	R	D	Y	V	A	I	L	L	E	M	Y
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	G	A	V	L	E	Q	Q	E	H	N	L	P	P	L	L	R	E	A	L	Q	I	M	D	S	D	D	G	E	Q	A	F	L	H	G	L	E	S	L	I	R	G	F
Template Known Secondary structure																									T	T	S		S
Template Predicted Secondary structure
Template SS confidence
		142	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions