|   |
2 | . | . | . | . | . | . | |
. | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | |
|
|
. | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
|
. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |
|
| . |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
K | V | G | F | I | G | L | . |
G | I | M | G | K | P | M | S | K | N | L | L | K | A | G | Y | . |
. |
. |
S | L | V | V | A | D | R | N | P | E | A | I | A | D | V | I | A | A | G | A | E | T | A | . |
. |
S | T | A | K | A | I | A | E | Q | C | D | V | I | I | T | M | L | P | N | S | P | H | V | K | E | V | A | L |
Query Conservation |   |
|
|   |
|
|
|
| . |
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   | . | . | . |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   | . | . |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|   |
|
|   |   |
|
|
|
|
|   |   |
|   |   |
|   |   |   |
|   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |
|   |   |   |   | . | . | . | . | . | . | . |   |
Template Sequence |   |
T | V | A | V | V | G | A | T | G | A | V | G | A | Q | M | I | K | M | L | E | E | S | T | L | P | I | D | K | I | R | Y | L | A | S | A | R | S | A | G | K | S | L | K | F | K | D | Q | D | I | T | I | E | E | T | T | E | T | A | F | E | G | V | D | I | A | L | F | S | A | G | S | S | . |
. |
. |
. |
. |
. |
. |
T |
Template Known Secondary structure |   |
 |  |  |  |  | T | T | T | S |  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |
|  |  |  |  |  |  |  |  |
| G | G | G | T | T |
|  |  |  |  | T | T |  |  |  |  |  |  |  |
|
| T | T | T | T | T | T |
| S |  |  |  |  |
| S |
|  |  | . | . | . | . | . | . | . |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | |
|
|
|
|
|
|
. |
  |
  |   |
76 | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
G | E | N | G | I | I | E | G | A | K | P | G | T | V | L | I | D | M | S | S | I | A | P | L | A | S | R | E | I | S | E | A | L | K | A | K | G | I | D | M | L | D | A | P | V | S | G | G | E | P | K | A | I | D | G | T | L | S | V | M | V | G | G | D | K | A | I | F | D | K | Y | Y | D | L | M | K | A | M | A | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |   |   |   |   |   |   |
|   |   |
|
|
|
|
|   | . | . | . | . | . | . | . | . | . | . | . |   |
|
|   |   |   |   |   |
|   |   |
|
|
|
|
|   |   |   |
|   |   |   |   |   |
|
|
|
|
|   |
|   |
|   |   |
|   |   |
|   |
|
|   |   |   |   |   |
|
Template Sequence |   |
S | A | K | Y | A | P | Y | A | V | K | A | G | V | V | V | V | D | N | T | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Y | F | R | Q | N | P | D | V | P | L | V | V | P | E | V | N | A | H | A | L | D | A | H | N | G | I | I | A | C | P | N | A | A | W | N | S | V | Q | I | A | E | T | L | H | E | R | G | L | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| S | S | . | . | . | . | . | . | . | . | . | . | . | T | T | T | T |
| T | T | S |
| B |
|
|  |  |  |  | G | G | G | G | G | G |
|
| S |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
77 | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
. | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . |
  |
  |   |
156 | . | . | . | 160 | . |
Predicted Secondary structure |   |
|  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
Query Sequence |   |
S | V | V | H | T | G |
Query Conservation |   |
  |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
Template Sequence |   |
R | P | T | A | E | L |
Template Known Secondary structure |   |
S |
|
| S | S |
|
Template Predicted Secondary structure |   |
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
  |   |
348 | . | 350 | . | . | . |
  |