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Job DescriptionP0ABQ2
Confidence100.00%DateThu Jan 5 11:16:04 GMT 2012
Rank9Aligned Residues284
% Identity37%Templatec3pefA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:6-phosphogluconate dehydrogenase, nad-binding; PDBTitle: crystal structure of gamma-hydroxybutyrate dehydrogenase from2 geobacter metallireducens in complex with nadp+
Resolution2.07 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   2.......10.........20.........30.........40.........50.........60.........70.........80.
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Query Sequence  KVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAETASTAKAIAEQCDVIITMLPNSPHVKEVALGENGII
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Template Sequence  KFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAALGAERAATP. EVVESCPVTFAMLADPAAAEEVCFGKHGVL
Template Known Secondary structure 

STT

SSGGGGTT

S

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S

SSSTT
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   3......10.........20.........30.........40.........50. ........60.........70.........80.
 
   82.......90.........100.........110.........120.........130.........140.........150.........160.
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Query Sequence  EGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVHTG
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Template Sequence  EGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGRFLEAPVSGSKKPAEDGTLIILAAGDRNLYDEAMPGFEKMGKKIIHLG
Template Known Secondary structure 

TT

S


TT




T


S
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   83......90.........100.........110.........120.........130.........140.........150.........160..
 
   162.......170.........180.........190.........200.........210.........220.........230.........240.
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Query Sequence  EIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIKDLA
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Template Sequence  DVGKGAEMKLVVNMVMGGMMACFCEGLALGEKAGLATDAILDVIGAGAMANPMFALKGGLIRDRNFAPAFPLKHMQKDLR
Template Known Secondary structure  STTTT

STT

TT



SSB
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   163......170.........180.........190.........200.........210.........220.........230.........240..
 
   242.......250.........260.........270.........280......
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Query Sequence  NALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEK
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Template Sequence  LAVALGDRVGQPLVASAAANELFKGARAAGFGDEDFSAIFKTYER
Template Known Secondary structure  T


TT
TTSBGGGGGGGG

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   243......250.........260.........270.........280.......
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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