Job Description P0ABQ2 Confidence 99.76% Date Thu Jan 5 11:16:04 GMT 2012 Rank 82 Aligned Residues 232 % Identity 15% Template c3ktdC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of a putative prephenate dehydrogenase (cgl0226)2 from corynebacterium glutamicum atcc 13032 at 2.60 a resolution Resolution 2.60 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.					50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																																																		.	.	.	.
Query SS confidence																																																		.	.	.	.
Query Sequence		K	V	G	F	I	G	L	G	I	M	G	K	P	M	S	K	N	L	L	K	A	G	Y	S	L	V	V	A	D	R	N	P	E	A	I	A	D	V	I	A	A	G	A	E	T	A	S	T	.	.	.	.	A	K	A	I	A	E	Q	C	D	V	I	I	T	M	L	P	N	S	P	H	V	K	E	V	A	L	G	E
Query Conservation																																																		.	.	.	.
Alig confidence																																																		.	.	.	.
Template Conservation
Template Sequence		P	V	C	I	L	G	L	G	L	I	G	G	S	L	L	R	D	L	H	A	A	N	H	S	V	F	G	Y	N	R	S	R	S	G	A	K	S	A	V	D	E	G	F	D	V	S	A	D	L	E	A	T	L	Q	R	A	A	A	E	D	A	L	I	V	L	A	V	P	X	T	A	I	D	S	L	L	D	A	V	H
Template Known Secondary structure									S													T	T								S	S										T	T					S												T	T							S
Template Predicted Secondary structure
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.
		78	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.									.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Query Sequence		N	G	I	I	E	G	A	K	P	G	T	V	L	I	D	M	S	S	I	A	P	L	A	S	R	E	I	S	E	A	L	K	A	K	G	I	D	M	L	D	A	P	V	S	G	G	E	P	K	A	I	.	.	.	.	.	.	.	.	D	G	T	L	S	V	M	V	G	G	D	K	.	.	.	.	.	.	.	.	.
Query Conservation																																																					.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Alig confidence			.	.	.	.	.																								.	.																					.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation			.	.	.	.	.																								.	.
Template Sequence		T	.	.	.	.	.	H	A	P	N	N	G	F	T	D	V	V	S	V	K	T	A	V	Y	D	A	V	K	A	.	.	R	N	X	Q	H	R	Y	V	G	S	H	P	X	A	G	T	A	N	G	W	S	A	S	X	D	G	L	F	K	R	A	V	W	V	V	T	F	D	Q	L	F	D	G	T	D	I	N	S	T
Template Known Secondary structure			.	.	.	.	.			T	T								S		S										.	.	T	T		G	G	G	B						T	T						G	G	G			S	S	S	S	T	T								G	G	G	T	S	S
Template Predicted Secondary structure			.	.	.	.	.																								.	.
Template SS confidence
		89						90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.			.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
				141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.
Query SS confidence		.	.
Query Sequence		.	.	A	I	F	D	K	Y	Y	D	L	M	K	A	M	A	G	S	V	V	H	T	G	E	I	G	A	G	N	V	T	K	L	A	N	Q	V	I	V	A	L	N	I	A	A	M	S	E	A	L	T	L	A	T	K	A	G	V	N	P	D	L	V	Y	Q	A	I	R	G	G	L	A	G	S	T	V	L	D	A	K
Query Conservation		.	.
Alig confidence		.	.																																																		.	.	.	.	.	.	.
Template Conservation																																																					.	.	.	.	.	.	.
Template Sequence		W	I	S	I	W	K	D	V	V	Q	X	A	L	A	V	G	A	E	V	V	P	S	R	V	G	P	H	D	A	A	A	A	R	V	S	H	L	T	H	I	L	A	E	T	L	A	I	V	G	D	N	.	.	.	.	.	.	.	G	G	A	L	S	L	S	L	A	A	G	S	Y	R	D	S	T	R	V	A	G	T
Template Known Secondary structure																T	T																			T																	.	.	.	.	.	.	.																	T	G	G	G	G	S
Template Predicted Secondary structure																																																					.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.								.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	M	V	M	D	R	N	F	K	P	G	F	R	I	D	L	H	I	K	D	L	A	N	A	L	D	T	S	H	G
Query Conservation
Alig confidence														.	.
Template Conservation														.	.
Template Sequence		D	P	G	L	V	R	A	X	C	E	S	N	.	.	A	G	P	L	V	K	A	L	D	E	A	L	A	I	L	H	E
Template Known Secondary structure												T	T	.	.
Template Predicted Secondary structure														.	.
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.			.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions