Job Description P0ABQ2 Confidence 99.94% Date Thu Jan 5 11:16:04 GMT 2012 Rank 34 Aligned Residues 275 % Identity 13% Template c3k96B_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:glycerol-3-phosphate dehydrogenase [nad(p)+]; PDBTitle: 2.1 angstrom resolution crystal structure of glycerol-3-phosphate2 dehydrogenase (gpsa) from coxiella burnetii Resolution 2.10 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.															.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	G	F	I	G	L	G	I	M	G	K	P	M	S	K	N	L	L	K	A	G	Y	S	L	V	V	A	D	R	N	P	E	A	I	A	D	V	I	A	A	G	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	T	A	S	T	A	K	A	I	A	E	Q	C	D	V	I	I	T	M	L	P	N	S
Query Conservation																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		P	I	A	I	L	G	A	G	S	W	G	T	A	L	A	L	V	L	A	R	K	G	Q	K	V	R	L	W	S	Y	E	S	D	H	V	D	E	M	Q	A	E	G	V	N	N	R	Y	L	P	N	Y	P	F	P	E	T	L	K	A	Y	C	D	L	K	A	S	L	E	G	V	T	D	I	L	I	V	V	P	S	F
Template Known Secondary structure									S												T	T	T								S												S	S	B	T	T	T	B	T	T					T	T					S							T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.					100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																		.	.	.	.
Query SS confidence																																		.	.	.	.
Query Sequence		P	H	V	K	E	V	A	L	G	E	N	G	I	I	E	G	A	K	P	G	T	V	L	I	D	M	S	S	I	A	P	L	.	.	.	.	A	S	R	E	I	S	E	A	L	K	A	K	G	I	D	M	L	D	A	P	V	S	G	G	E	P	K	A	I	D	G	T	L	S	V	M	V	G	G	D	K	A	I	F
Query Conservation																																		.	.	.	.
Alig confidence		.	.	.	.																													.	.	.	.
Template Conservation		.	.	.	.
Template Sequence		.	.	.	.	A	F	H	E	V	I	T	R	M	K	P	L	I	D	A	K	T	R	I	A	W	G	T	K	G	L	A	K	G	S	R	L	L	H	E	V	V	A	T	E	L	G	Q	V	P	M	A	V	I	S	G	P	S	L	A	T	E	V	A	A	N	L	P	T	A	V	S	L	A	S	N	N	S	Q	F	S
Template Known Secondary structure		.	.	.	.										T	T	T			T	T									S			T	T	T													S								S	S								T	T										S
Template Predicted Secondary structure		.	.	.	.
Template SS confidence
						87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.																		.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	K	Y	Y	D	L	M	K	A	M	A	G	S	V	V	H	T	G	E	I	G	A	G	N	V	T	K	L	A	N	Q	V	I	V	A	L	N	I	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	S	E	A	L	T	L	A	T	K	A	G	V	N	P	D	L	V	Y	Q	A	I	R
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	D	L	I	E	R	L	H	G	Q	R	F	R	V	Y	K	N	D	D	M	I	G	V	E	L	C	G	S	V	K	N	I	L	A	I	A	T	G	I	S	D	G	L	K	L	G	S	N	A	R	A	A	L	I	T	R	G	L	T	E	M	G	R	L	V	S	V	F	G	G	K	Q	E	T	L	T	G	L	A	G
Template Known Secondary structure											S	S							S																									T	T																									T							T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.
		207	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.												.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	L	A	G	S	T	V	L	D	A	K	A	P	M	V	M	D	R	N	F	K	P	G	F	R	I	D	L	H	.	.	.	.	.	.	.	.	.	.	.	I	K	D	L	A	N	A	L	D	T	S	H	G	V	G	A	Q	L	P	L	T	A	A	V	M	E	M	M	Q	A	L	R	A	D	G	L	G	T	A
Query Conservation																																.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.	.	.	.
Template Conservation																																																																							.	.	.	.	.	.	.
Template Sequence		L	G	D	L	V	L	T	C	T	D	N	Q	S	R	N	R	R	F	G	L	A	L	G	E	G	V	D	K	K	E	A	Q	Q	A	I	G	Q	A	I	E	G	L	Y	N	T	D	Q	V	H	A	L	A	Q	K	H	A	I	E	M	P	L	T	F	Q	V	H	R	I	L	.	.	.	.	.	.	.	H	E	D	L
Template Known Secondary structure												T	T												T	T												S																		T	T														.	.	.	.	.	.	.		S
Template Predicted Secondary structure																																																																							.	.	.	.	.	.	.
Template SS confidence
		243	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.								.	.	.	.
		276	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	H	S	A	L	A	C	Y	Y	E	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	P	Q	Q	A	V	Q	E	L	L	E	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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