Job Description P0ABQ2 Confidence 99.90% Date Thu Jan 5 11:16:04 GMT 2012 Rank 45 Aligned Residues 244 % Identity 16% Template c3k6jA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:protein f01g10.3, confirmed by transcript evidence; PDBTitle: crystal structure of the dehydrogenase part of multifuctional enzyme 12 from c.elegans Resolution 2.20 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.																						.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60
Predicted Secondary structure																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	G	F	I	G	L	G	I	M	G	K	P	M	S	K	N	L	L	K	A	G	Y	S	L	V	V	A	D	R	N	P	E	A	I	A	D	V	I	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	G	A	E	T	A	S	T	A	K	A	I	A	E	Q	C	D	V	I
Query Conservation																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										.
Template Conservation																																																																								.
Template Sequence		S	V	A	I	I	G	G	G	T	M	G	K	A	M	A	I	C	F	G	L	A	G	I	E	T	F	L	V	V	R	N	E	Q	R	C	K	Q	E	L	E	V	M	Y	A	R	E	K	S	F	K	R	L	N	D	K	R	I	E	K	I	N	A	N	L	K	I	T	S	D	F	.	H	K	L	S	N	C	D	L	I
Template Known Secondary structure									S													T	T								S																			T	T	S											T	T					S		G	.	G	G		T	T		S
Template Predicted Secondary structure																																																																								.
Template SS confidence
		41	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.
		61	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Predicted Secondary structure
Query SS confidence
Query Sequence		I	T	M	L	P	N	S	P	H	V	K	E	V	A	L	G	E	N	G	I	I	E	G	A	K	P	G	T	V	L	I	D	M	S	S	I	A	P	L	A	S	R	E	I	S	E	A	L	K	A	K	G	I	D	M	L	D	A	P	V	S	G	G	E	P	K	A	I	D	G	T	L	S	V	M	V	G	G	D	K
Query Conservation
Alig confidence																	.	.																							.	.	.
Template Conservation																	.	.																							.	.	.
Template Sequence		V	E	S	V	I	E	D	M	K	L	K	K	E	L	F	.	.	A	N	L	E	N	I	C	K	S	T	C	I	F	G	T	N	T	S	S	L	D	L	.	.	.	N	E	I	S	S	V	L	R	D	P	S	N	L	V	G	I	H	F	F	N	P	A	N	V	I	R	L	V	E	I	I	Y	G	S	H	T	S	S
Template Known Secondary structure							S										.	.					T	T	S		T	T								S	S	S			.	.	.					T	T	S	S	S	G	G	G								S	S	T	T	T										S	S
Template Predicted Secondary structure																	.	.																							.	.	.
Template SS confidence
		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.			.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.				.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.
		141	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.		.	.	.	.	210	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		A	I	F	D	K	Y	Y	D	L	M	K	A	M	A	G	S	V	V	H	T	G	E	I	G	A	G	N	V	T	K	L	A	N	Q	V	I	V	A	L	N	I	A	A	M	S	E	A	L	T	L	A	T	K	A	G	V	N	P	D	L	V	Y	Q	A	I	.	R	G	G	L	A	G	S	T	V	L	D	A	K	A
Query Conservation																																																																			.
Alig confidence																										.	.	.	.	.	.	.	.																																		.
Template Conservation																										.	.	.	.	.	.	.	.
Template Sequence		Q	A	I	A	T	A	F	Q	A	C	E	S	I	K	K	L	P	V	L	V	G	N	C	K	.	.	.	.	.	.	.	.	S	F	V	F	N	R	L	L	H	V	Y	F	D	Q	S	Q	K	L	M	Y	E	Y	G	Y	L	P	H	Q	I	D	K	I	I	T	N	F	G	F	L	M	G	P	M	T	V	A	D	M
Template Known Secondary structure														T	T							S	S			.	.	.	.	.	.	.	.																					T	S															T	B	S	S
Template Predicted Secondary structure																										.	.	.	.	.	.	.	.
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.									.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.		.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.
Predicted Secondary structure																																						.
Query SS confidence																																						.
Query Sequence		P	M	V	M	D	R	N	F	K	P	G	F	R	I	D	L	H	I	K	D	L	A	N	A	L	D	T	S	H	G	V	G	A	Q	L	P	.	L	T	A	A	V	M	E	M	M	Q	A	L	R	A	D	G	L	G	T	A	D	H
Query Conservation																																						.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																.
Template Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	G	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	V	M	E	K	L	K	K	E	N	G	L	E	P	N	P	I	E	K	E	M	W	R	L	K	R	Y	G	R	K	T	N	K	G	F	Y	K	Y
Template Known Secondary structure				T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.										S														T	T			B	G	G	G	T	B	S	S	S
Template Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		267	.	.																			270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions