Return to main results Retrieve Phyre Job Id

Job DescriptionP0ABQ2
Confidence100.00%DateThu Jan 5 11:16:04 GMT 2012
Rank6Aligned Residues282
% Identity31%Templatec3g0oA_
PDB info PDB header:oxidoreductaseChain: A: PDB Molecule:3-hydroxyisobutyrate dehydrogenase; PDBTitle: crystal structure of 3-hydroxyisobutyrate dehydrogenase2 (ygbj) from salmonella typhimurium
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30.........40... ......50.........60.........70.........
Predicted Secondary structure 










.









Query SS confidence 










































.



































Query Sequence  MKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAG. AETASTAKAIAEQCDVIITMLPNSPHVKEVALGENG
Query Conservation 


 




 

  

  

  
  
    
       
   
.        
     
 
   
               
Alig confidence 










































.


































.
Template Conservation 






 
 

  

  
   
  
   
        
             
     
 
   
        
     .
Template Sequence  FHVGIVGLGSXGXGAARSCLRAGLSTWGADLNPQACANLLAEGACGAAASAREFAGVVDALVILVVNAAQVRQVLFDGV.
Template Known Secondary structure 


STT

S
TT
SSSSTTTTTT
S

SS



.
Template Predicted Secondary structure 






















.
Template SS confidence 















































































   7..10.........20.........30.........40.........50.........60.........70.........80.....
 
   80.........90.........100.........110.........120.........130.........140.........150.........
Predicted Secondary structure 
































Query SS confidence 















































































Query Sequence  IIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAIDGTLSVMVGGDKAIFDKYYDLMKAMAGSVVH
Query Conservation                

                                                      
   
     
Alig confidence  .














































































Template Conservation  .        

   

                                  
      
            
   
     
Template Sequence  . AHLXKPGSAVXVSSTISSADAQEIAAALTALNLNXLDAPVSGGAVKAAQGEXTVXASGSEAAFTRLKPVLDAVASNVYR
Template Known Secondary structure  .GGGS
TT

S


TTT


S
TT


Template Predicted Secondary structure  .































Template SS confidence 















































































   88.90.........100.........110.........120.........130.........140.........150.........160......
 
   160.. .......170.........180.........190.........200.........210.........220.........230........
Predicted Secondary structure 

.





















Query SS confidence 


.











































































Query Sequence  TGE. IGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRIDLHIK
Query Conservation     .   
   

  
           
        
                                           
Alig confidence 


.











































































Template Conservation         
   
   
           
    
   

                                         
Template Sequence  ISDTPGAGSTVKIIHQLLAGVHIAAAAEAXALAARAGIPLDVXYDVVTHAAGNSWXFENRXQHVVDGDYTPRSAVDIFVK
Template Known Secondary structure  SSTTTT

TTSTT

TT



SSB
Template Predicted Secondary structure 




















Template SS confidence 















































































   167..170.........180.........190.........200.........210.........220.........230.........240......
 
   239240.........250.........260.........270.........280....
Predicted Secondary structure 











Query SS confidence 













































Query Sequence  DLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYY
Query Conservation 
       
   
   
               
    
  

    
Alig confidence 













































Template Conservation 
       
   

  
           
   
    
 


    
Template Sequence  DLGLVADTAKALRFPLPLASTALNXFTSASNAGYGKEDDSAVIKIF
Template Known Secondary structure  TT


TTTTTSBGGGGGGG
Template Predicted Secondary structure 












Template SS confidence 













































   247..250.........260.........270.........280.........290..
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions