Job Description P0ABQ2 Confidence 99.65% Date Thu Jan 5 11:16:04 GMT 2012 Rank 94 Aligned Residues 237 % Identity 15% Template c3c24A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:putative oxidoreductase; PDBTitle: crystal structure of a putative oxidoreductase (yp_511008.1) from2 jannaschia sp. ccs1 at 1.62 a resolution Resolution 1.62 Å

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		2	.	.	.	.	.	.	.	10	.		.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		K	V	G	F	I	G	L	G	I	M	.	G	K	P	M	S	K	N	L	L	K	A	G	Y	S	L	V	V	A	D	R	N	P	E	A	I	A	D	V	I	A	A	G	A	E	T	A	S	T	A	K	A	I	A	E	Q	C	D	V	I	I	T	M	L	P	N	S	P	H	V	K	E	V	A	L	G	E	N	G	I
Query Conservation												.
Alig confidence												.																																			.																						.	.	.	.
Template Conservation																																															.																						.	.	.	.
Template Sequence		T	V	A	I	L	G	A	G	G	K	X	G	A	R	I	T	R	K	I	H	D	S	A	H	H	L	A	A	I	E	I	A	P	E	G	R	D	R	L	Q	G	X	G	I	P	.	L	T	D	G	D	G	W	I	D	E	A	D	V	V	V	L	A	L	P	D	N	.	.	.	.	I	I	E	K	V	A	E	D	I
Template Known Secondary structure							T	T	T	S													S	S	S								S										T	T			.				S	S	G	G	G	G	T		S						S				.	.	.	.
Template Predicted Secondary structure																																															.																						.	.	.	.
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.		.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.					.	.	80	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.																		.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	G	A	K	P	G	T	V	L	I	D	M	S	S	I	A	P	L	A	S	R	E	I	S	E	A	L	K	A	K	G	I	D	M	L	D	A	P	V	S	G	G	E	P	K	A	I	D	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	S	V	M	V	G	G	D	K	A	I	F
Query Conservation																																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																	.	.	.	.	.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.
Template Sequence		V	P	R	V	R	P	G	T	I	V	L	I	L	D	A	.	.	.	.	.	A	A	P	Y	A	G	V	X	P	E	R	A	D	I	T	Y	F	I	G	H	P	C	H	P	P	L	F	N	D	E	T	D	P	A	A	R	T	D	Y	H	G	G	I	A	K	Q	A	I	V	C	A	L	X	Q	G	P	E	E	H	Y
Template Known Secondary structure		G	G	G	S		T	T						S		S	.	.	.	.	.						T		S				T	T	S										S		S	S					S					T		S	S	S	S	S	S											S		T
Template Predicted Secondary structure																	.	.	.	.	.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.						.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.					170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.		.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.																																				.
Query SS confidence																												.	.	.	.																																				.
Query Sequence		D	K	Y	Y	D	L	M	K	A	M	A	G	S	V	V	H	T	G	E	I	G	A	G	N	V	T	.	.	.	.	K	L	A	N	Q	V	I	V	A	L	N	I	A	A	M	S	E	A	L	T	L	A	T	K	A	G	V	N	P	D	L	V	Y	Q	A	.	I	R	G	G	L	A	G	S	T	V	L	D	A	K
Query Conservation																												.	.	.	.																																				.
Alig confidence																												.	.	.	.																																				.
Template Conservation
Template Sequence		A	I	G	A	D	I	C	E	T	X	W	S	P	V	T	R	T	H	R	V	T	T	E	Q	L	A	I	L	E	P	G	L	S	E	X	V	A	X	P	F	V	E	T	X	V	H	A	V	D	E	C	A	D	R	Y	G	I	D	R	Q	A	A	L	D	F	X	I	G	H	L	N	V	E	I	A	X	W	F	G	Y
Template Known Secondary structure												T		S																T	T					T	T																																										T	T	S
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	P	M	V	M	D	R	N	F	K	P	G	F	R	I	D	L	H	I	K	D	L	A	N	A	L	D	T	S	H
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	K	V	A	A	L	R	L	X	E	F	A	K	D	I	V	V	K	E	D	W	R	E	A	L	N	P	A	K
Template Known Secondary structure		S						S	T	T									S		T	T	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions