Job Description P0ABQ2 Confidence 100.00% Date Thu Jan 5 11:16:04 GMT 2012 Rank 14 Aligned Residues 259 % Identity 20% Template c2p4qA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:6-phosphogluconate dehydrogenase, decarboxylating 1; PDBTitle: crystal structure analysis of gnd1 in saccharomyces cerevisiae Resolution 2.37 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.				.	60	.	.	.	.	.	.	.	.	.	70	.	.
Predicted Secondary structure																																														.	.	.	.	.															.	.	.
Query SS confidence																																														.	.	.	.	.															.	.	.
Query Sequence		M	K	V	G	F	I	G	L	G	I	M	G	K	P	M	S	K	N	L	L	K	A	G	Y	S	L	V	V	A	D	R	N	P	E	A	I	A	D	V	I	A	A	G	A	.	.	.	.	.	E	T	A	S	T	A	K	A	I	A	E	Q	C	D	.	.	.	V	I	I	T	M	L	P	N	S	P	H	V	K	E
Query Conservation																																														.	.	.	.	.															.	.	.
Alig confidence																																														.	.	.	.	.															.	.	.
Template Conservation
Template Sequence		A	D	F	G	L	I	G	L	A	V	M	G	Q	N	L	I	L	N	A	A	D	H	G	F	T	V	C	A	Y	N	R	T	Q	S	K	V	D	H	F	L	A	N	E	A	K	G	K	S	I	I	G	A	T	S	I	E	D	F	I	S	K	L	K	R	P	R	K	V	M	L	L	V	K	A	G	A	P	V	D	A
Template Known Secondary structure			S							S													T	T								S	S	S									T	T	T	T	T	S	S					S	S							T	S		S	S									S	S
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	A	L	G	E	N	G	I	I	E	G	A	K	P	G	T	V	L	I	D	M	S	S	I	A	P	L	A	S	R	E	I	S	E	A	L	K	A	K	G	I	D	M	L	D	A	P	V	S	G	G	E	P	K	A	I	D	G	T	L	S	V	M	V	G	G	D	K	A	I	F	D	K	Y	Y	D	L	M	K	A
Query Conservation
Alig confidence				.	.	.																																																						.
Template Conservation				.	.	.																																																						.
Template Sequence		L	I	.	.	.	N	Q	I	V	P	L	L	E	K	G	D	I	I	I	D	G	G	N	S	H	F	P	D	S	N	R	R	Y	E	E	L	K	K	K	G	I	L	F	V	G	S	G	V	S	G	G	E	E	G	A	R	Y	G	.	P	S	L	M	P	G	G	S	E	E	A	W	P	H	I	K	N	I	F	Q	S
Template Known Secondary structure				.	.	.				G	G	G			T	T							S																	T	T										S									.									G	G	G
Template Predicted Secondary structure				.	.	.																																																						.
Template SS confidence
		83	.				.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.		.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		153	.	.	.							.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.		.	.	.	.	.	.	200	.	.	.	.				.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure						.	.	.	.	.	.																																						.												.	.	.
Query SS confidence						.	.	.	.	.	.																																						.												.	.	.
Query Sequence		M	A	G	S	.	.	.	.	.	.	V	V	H	T	G	E	I	G	A	G	N	V	T	K	L	A	N	Q	V	I	V	A	L	N	I	A	A	M	S	E	A	L	T	L	A	T	K	.	A	G	V	N	P	D	L	V	Y	Q	A	.	.	.	I	R	G	G	L	A	G	S	T	V	L	D	A	K	A	P	M	V
Query Conservation						.	.	.	.	.	.																																						.												.	.	.
Alig confidence						.	.	.	.	.	.																																						.												.	.	.
Template Conservation
Template Sequence		I	S	A	K	S	D	G	E	P	C	C	E	W	V	G	P	A	G	A	G	H	Y	V	K	M	V	H	N	G	I	E	Y	G	D	M	Q	L	I	C	E	A	Y	D	I	M	K	R	L	G	G	F	T	D	K	E	I	S	D	V	F	A	K	W	N	N	G	V	L	D	S	F	L	V	E	I	T	R	D	I	L
Template Known Secondary structure			S				T	T			S							T	T																														T	T																T	T	T	T		B
Template Predicted Secondary structure
Template SS confidence
		159	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.							.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																					.	.	.	.	.	.
Query SS confidence																					.	.	.	.	.	.
Query Sequence		M	D	R	N	F	K	P	G	F	R	I	D	L	H	I	K	D	L	A	.	.	.	.	.	.	N	A	L	D	T	S	H	G	V	G	A	Q	L	P	L	T	A	A	V	M	E	M
Query Conservation																					.	.	.	.	.	.
Alig confidence																					.	.	.	.	.	.
Template Conservation
Template Sequence		K	F	D	D	V	D	G	K	P	L	V	E	K	I	M	D	T	A	G	Q	K	G	T	G	K	W	T	A	I	N	A	L	D	L	G	M	P	V	T	L	I	G	E	A	V	F	A
Template Known Secondary structure		T		B		T	T	S	S	B	G	G	G	G	S								S													T
Template Predicted Secondary structure
Template SS confidence
		239	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions