Job Description P0ABQ2 Confidence 99.97% Date Thu Jan 5 11:16:04 GMT 2012 Rank 26 Aligned Residues 260 % Identity 17% Template c2o3jC_ PDB info PDB header:oxidoreductase Chain: C: PDB Molecule:udp-glucose 6-dehydrogenase; PDBTitle: structure of caenorhabditis elegans udp-glucose dehydrogenase Resolution 1.88 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.			.	.	.	.	.	30	.	.	.	.	.	.	.	.	.																				40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	G	F	I	G	L	G	I	M	G	K	P	M	S	K	N	L	L	K	A	G	Y	.	.	S	L	V	V	A	D	R	N	P	E	A	I	A	D	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	A	G	A	E	T	A	S	T	A	K	A	I	A	E	Q	C	D	V
Query Conservation																										.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		S	K	V	V	C	V	G	A	G	Y	V	G	G	P	T	C	A	M	I	A	H	K	C	P	H	I	T	V	T	V	V	D	M	N	T	A	K	I	A	E	W	N	S	D	K	L	P	I	Y	E	P	G	L	D	E	I	V	F	A	A	R	G	R	N	L	F	F	S	S	D	I	P	K	A	I	A	E	A	D	L
Template Known Secondary structure		S								S	T	T													T	T	S							S									T	S	S	S		S	S			T	T	T						T	T	B	T	T	T					S										S
Template Predicted Secondary structure
Template SS confidence
		10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		60	.	.	.	.	.	.	.												.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.				.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure										.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query SS confidence										.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query Sequence		I	I	T	M	L	P	N	S	.	.	.	.	.	.	.	.	.	.	.	P	H	V	K	E	V	A	L	G	E	N	G	I	I	E	G	A	K	P	G	T	V	L	I	D	M	S	S	I	A	P	L	A	S	R	E	I	S	E	A	L	K	A	K	G	.	.	.	I	D	M	L	D	A	P	V	S	G	G	E	P
Query Conservation										.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Alig confidence										.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template Conservation
Template Sequence		I	F	I	S	V	N	T	P	T	K	M	Y	G	R	G	K	G	M	A	P	D	L	K	Y	V	E	S	V	S	R	T	I	A	Q	Y	A	G	G	P	K	I	V	V	E	K	S	T	V	P	V	K	A	A	E	S	I	G	C	I	L	R	E	A	Q	K	L	K	F	Q	V	L	S	N	P	E	F	L	A	E	G
Template Known Secondary structure										B		S	S	S	T	T	T	T	T	S	B		T													S			S								S				T	T											T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		126	.	.	.	130	.	.					.	.	.	.	.	.	.	140					.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure									.	.	.	.									.	.	.	.															.
Query SS confidence									.	.	.	.									.	.	.	.															.
Query Sequence		K	A	I	D	G	T	L	.	.	.	.	S	V	M	V	G	G	D	K	.	.	.	.	A	I	F	D	K	Y	Y	D	L	M	K	A	M	A	.	G	S	V	V	H	T	G	E	I	G	A	G	N	V	T	K	L	A	N	Q	V	I	V	A	L	N	I	A	A	M	S	E	A	L	T	L	A	T	K	A	G	V
Query Conservation									.	.	.	.									.	.	.	.															.
Alig confidence									.	.	.	.									.	.	.	.															.
Template Conservation
Template Sequence		T	A	M	K	D	L	A	N	P	D	R	V	L	I	G	G	E	S	S	P	E	G	L	Q	A	V	A	E	L	V	R	I	Y	E	N	W	V	P	R	N	R	I	I	T	T	N	T	W	S	S	E	L	S	K	L	V	A	N	A	F	L	A	Q	R	I	S	S	I	N	S	I	S	A	V	C	E	A	T	G	A
Template Known Secondary structure									S		S								S	S																T	T	S		G	G	G																																						T
Template Predicted Secondary structure
Template SS confidence
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.
		197	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.			.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																											.	.
Query SS confidence																																																											.	.
Query Sequence		N	P	D	L	V	Y	Q	A	I	R	G	G	L	A	G	S	T	V	L	D	A	K	A	P	M	V	M	D	R	N	F	K	P	G	F	R	I	D	L	H	I	K	D	L	A	N	A	L	D	T	S	H	G	V	G	A	Q	.	.	L	P	L	T	A	A	V	M	E	M	M	Q	A	L	R	A
Query Conservation																																																											.	.
Alig confidence																								.	.	.	.	.	.	.	.	.																											.	.
Template Conservation																								.	.	.	.	.	.	.	.	.
Template Sequence		E	I	S	E	V	A	H	A	V	G	Y	D	T	R	I	G	S	K	F	L	Q	A	.	.	.	.	.	.	.	.	.	S	V	G	F	G	G	S	C	F	Q	K	D	V	L	S	L	V	Y	L	C	E	S	L	N	L	P	Q	V	A	D	Y	W	Q	G	V	I	N	I	N	N	W	Q	R	R
Template Known Secondary structure												T	S	T	T	T		S	T	T				.	.	.	.	.	.	.	.	.		S				S	S	S															T	T
Template Predicted Secondary structure																								.	.	.	.	.	.	.	.	.
Template SS confidence
		254	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.										.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions