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Job DescriptionP0ABQ2
Confidence99.87%DateThu Jan 5 11:16:04 GMT 2012
Rank57Aligned Residues260
% Identity12%Templatec2f1kD_
PDB info PDB header:oxidoreductaseChain: D: PDB Molecule:prephenate dehydrogenase; PDBTitle: crystal structure of synechocystis arogenate dehydrogenase
Resolution1.55 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  MKVGFIGLGIMGKPMSKNLLKAGYSLVVADRNPEAIADVIAAGAE. TASTAKAIAEQCDVIITMLPNSPHVKEVALGENG
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Template Sequence  MKIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKAVERQLVDEAGQDLSLLQTAKIIFLCTPIQ. . . . LILPTLEK
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STT

S
TTS
SS
GGGGTT
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GG....G
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Query Sequence  IIEGAKPGTVLIDMSSIAPLASREISEALKAKGIDMLDAPVSGGEPKAI. . . . . . DGTLSVMVGGDKAIFDKYYDLMKAM
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Template Sequence  LIPHLSPTAIVTDVASVKTAIAEPASQLWSGFIGGHPAGTAAQGIDGAEENLFVNAPYVLTPTEYTDPEQLALRSVLEPL
Template Known Secondary structure  GGGS
TT


S

TTT
TT



S

SGGG

SSTTTT


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GGG
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   154.....160.........170.........180.........190.........200.........210.........220.........230...
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Query Sequence  AGSVVHTGEIGAGNVTKLANQVIVALNIAAMSEALTLATKAGVNPDLVYQAIRGGLAGSTVLDAKAPMVMDRNFKPGFRI
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Template Sequence  GVKIYLCTPADHDQAVAWISHLPVMVSAALIQ. . ACAGEKDGDILKLAQNLASSGFRDTSRVGGGNPELGT. . . . . . . . .
Template Known Secondary structure  T


T..T
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   159160.........170.........180.........190 .........200.........210.........220.......
 
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Query Sequence  DLHIKDLANALDTSHGVGAQLPLTAAVMEMMQALRADGLGTADHSALACYYEK
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Template Sequence  MMATYNQRALLKSLQD. . . . . . . YRQHLDQLITLISNQ. . . . QWPELHRLLQQ
Template Known Secondary structure  T.......TT....
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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