Job Description P0ABQ2 Confidence 99.96% Date Thu Jan 5 11:16:04 GMT 2012 Rank 29 Aligned Residues 272 % Identity 16% Template c2ep9A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:l-gulonate 3-dehydrogenase; PDBTitle: crystal structure of the rabbit l-gulonate 3-dehydrogenase2 (nadh form) Resolution 1.85 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.																										.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	G	F	I	G	L	G	I	M	G	K	P	M	S	K	N	L	L	K	A	G	Y	S	L	V	V	A	D	R	N	P	E	A	I	A	D	V	I	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	A	E	T	A	S	T	A	K	A	I	A	E	Q
Query Conservation																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	V	L	I	V	G	S	G	L	V	G	R	S	W	A	M	L	F	A	S	G	G	F	R	V	K	L	Y	D	I	E	P	R	Q	I	T	G	A	L	E	N	I	R	K	E	M	K	S	L	Q	Q	S	G	S	L	K	G	S	L	S	A	E	E	Q	L	S	L	I	S	S	C	T	N	L	A	E	A	V	E	G
Template Known Secondary structure									S													T	T								S																						T	T				S	S	S								T					S						T	T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	V	I	I	T	M	L	P	N	S	P	H	V	K	E	V	A	L	G	E	N	G	I	I	E	G	A	K	P	G	T	V	L	I	D	M	S	S	I	A	P	L	A	S	R	E	I	S	E	A	L	K	A	K	G	I	D	M	L	D	A	P	V	S	G	G	E	P	K	A	I	D	G	T	L	S	V	M	V
Query Conservation
Alig confidence																							.	.																					.	.	.
Template Conservation																							.	.																					.	.	.
Template Sequence		V	V	H	I	Q	E	C	V	P	E	N	L	D	L	K	R	K	I	F	A	Q	.	.	L	D	S	I	V	D	D	R	V	V	L	S	S	S	S	S	C	L	L	P	.	.	.	S	K	L	F	T	G	L	A	H	V	K	Q	C	I	V	A	H	P	V	N	P	P	Y	Y	I	P	L	V	E	L	V	P	H	P
Template Known Secondary structure			S								S												.	.			T	T			S	S								S	S				.	.	.					T	T		T	T	G	G	G								S	S	T	T	T										T
Template Predicted Secondary structure																							.	.																					.	.	.
Template SS confidence
		88	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.				.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	G	D	K	A	I	F	D	K	Y	Y	D	L	M	K	A	M	A	G	S	V	V	H	T	G	E	I	G	A	G	N	V	T	K	L	A	N	Q	V	I	V	A	L	N	I	A	A	M	S	E	A	L	T	L	A	T	K	A	G	V	N	P	D	L	V	Y	Q	A	I	R	G	G	L	A	G	S	T	V	L	D
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.
Template Sequence		E	T	S	P	A	T	V	D	R	T	H	A	L	M	R	K	I	G	Q	S	P	V	R	V	L	K	E	I	D	G	F	V	L	N	R	L	.	.	.	.	.	.	.	Q	Y	A	I	I	S	E	A	W	R	L	V	E	E	G	I	V	S	P	S	D	L	D	L	V	M	S	D	G	L	G	M	R	Y	A	F	I
Template Known Secondary structure		T																T	T							S	S			T	T	T	T					.	.	.	.	.	.	.														T	T	S	S											T	T						T	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.
Template SS confidence
		163	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.								.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.		.	280	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																.
Query SS confidence																																																																.
Query Sequence		A	K	A	P	M	V	M	D	R	N	F	K	P	G	F	R	I	D	L	H	I	K	D	L	A	N	A	L	D	T	S	H	G	V	G	A	Q	L	P	L	T	A	A	V	M	E	M	M	Q	A	L	R	A	D	G	L	G	T	A	D	H	S	.	A	L	A	C	Y	Y	E	K	L	A
Query Conservation																																																																.
Alig confidence								.	.	.																																																						.
Template Conservation								.	.	.
Template Sequence		G	P	L	E	T	M	.	.	.	H	L	N	A	E	G	M	L	S	Y	S	D	R	Y	S	E	G	M	K	R	V	L	K	S	F	G	S	I	P	E	F	S	G	A	T	V	E	K	V	N	Q	A	M	C	K	K	V	P	A	D	P	E	H	L	A	A	R	R	E	W	R	D	E	C
Template Known Secondary structure								.	.	.			T	T	T	S																		T																							S		S	S
Template Predicted Secondary structure								.	.	.
Template SS confidence
		236	.	.	.	240	.				.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions