Job Description P0ABQ2 Confidence 99.88% Date Thu Jan 5 11:16:04 GMT 2012 Rank 54 Aligned Residues 254 % Identity 13% Template c1z82A_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:glycerol-3-phosphate dehydrogenase; PDBTitle: crystal structure of glycerol-3-phosphate dehydrogenase (tm0378) from2 thermotoga maritima at 2.00 a resolution Resolution 2.00 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.											.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.
Predicted Secondary structure																																														.	.	.	.	.	.	.	.	.	.
Query SS confidence																																														.	.	.	.	.	.	.	.	.	.
Query Sequence		K	V	G	F	I	G	L	G	I	M	G	K	P	M	S	K	N	L	L	K	A	G	Y	S	L	V	V	A	D	R	N	P	E	A	I	A	D	V	I	A	A	G	A	E	.	.	.	.	.	.	.	.	.	.	T	A	S	T	A	K	A	I	A	E	Q	C	D	V	I	I	T	M	L	P	N	S	P	H	V	K
Query Conservation																																														.	.	.	.	.	.	.	.	.	.
Alig confidence																																														.	.	.	.	.	.	.	.	.	.																							.	.	.	.
Template Conservation																																																																														.	.	.	.
Template Sequence		R	F	F	V	L	G	A	G	S	W	G	T	V	F	A	Q	X	L	H	E	N	G	E	E	V	I	L	W	A	R	R	K	E	I	V	D	L	I	N	V	S	H	T	S	P	Y	V	E	E	S	K	I	T	V	R	A	T	N	D	L	E	E	I	K	K	E	D	I	L	V	I	A	I	P	V	Q	.	.	.	.
Template Known Secondary structure									S													T	T								S	S											S		B	T	T	B	T	T					S				S		G	G	G			T	T							S		G	G	.	.	.	.
Template Predicted Secondary structure																																																																														.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		72	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.					.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		E	V	A	L	G	E	N	G	I	I	E	G	A	K	P	G	T	V	L	I	D	M	S	S	I	.	.	.	.	A	P	L	A	S	R	E	I	S	E	A	L	K	A	K	G	I	D	M	L	D	A	P	V	S	G	G	E	P	K	A	I	D	G	T	L	S	V	M	V	G	G	D	K	A	I	F	D	K	Y	Y
Query Conservation																											.	.	.	.
Alig confidence		.	.	.																							.	.	.	.																																													.	.	.
Template Conservation		.	.	.																																																																							.	.	.
Template Sequence		.	.	.	Y	I	R	E	H	L	L	R	L	P	V	K	P	S	X	V	L	N	L	S	K	G	I	E	I	K	T	G	K	R	V	S	E	I	V	E	E	I	L	G	C	P	Y	A	V	L	S	G	P	S	H	A	E	E	V	A	K	K	L	P	T	A	V	T	L	A	G	E	N	S	.	.	.	K	E	L	Q
Template Known Secondary structure		.	.	.	G						T	T		S	S			S											T	T	T												T									S	S								T	T										T	T		.	.	.
Template Predicted Secondary structure		.	.	.																																																																							.	.	.
Template SS confidence
					80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.				150	.	.	.
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.																		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	M	K	A	M	A	G	S	V	V	H	T	G	E	I	G	A	G	N	V	T	K	L	A	N	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	V	A	L	N	I	A	A	M	S	E	A	L	T	L	A	T	K	A	G	V	N	P	D	L	V	Y	Q	A	I	R	G	G	L	A
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	R	I	S	T	E	Y	F	R	V	Y	T	C	E	D	V	V	G	V	E	I	A	G	A	L	K	N	V	I	A	I	A	A	G	I	L	D	G	F	G	G	W	D	N	A	K	A	A	L	E	T	R	G	I	Y	E	I	A	R	F	G	X	F	F	G	A	D	Q	K	T	F	X	G	L	A	G	I	G	D	L
Template Known Secondary structure							S	S							S																									T	T																								T	T							T	S	T	T	T
Template Predicted Secondary structure
Template SS confidence
		154	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
		211	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.												.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	S	T	V	L	D	A	K	A	P	M	V	M	D	R	N	F	K	P	G	F	R	I	D	L	H	I	K	.	.	.	.	.	.	.	.	.	.	.	D	L	A	N	A	L	D	T	S	H	G	V	G	A	Q	L	P	L	T	A	A	V	M	E	M	M	Q
Query Conservation																														.	.	.	.	.	.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		X	V	T	C	N	S	R	Y	S	R	N	R	R	F	G	E	L	I	A	R	G	F	N	P	L	K	L	L	E	S	S	N	Q	V	V	E	G	A	F	T	V	K	A	V	X	K	I	A	K	E	N	K	I	D	X	P	I	S	E	E	V	Y	R	V	V	Y
Template Known Secondary structure								T	T													T									T		S	S			T															T	T
Template Predicted Secondary structure
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions