 |
Job Description | P0ABQ2 | Confidence | 98.48% | Date | Thu Jan 5 11:16:04 GMT 2012 |
Rank | 223 | Aligned Residues | 89 |
% Identity | 19% | Template | c1v8bA_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:adenosylhomocysteinase; |
PDBTitle: crystal structure of a hydrolase
|
Resolution | 2.40 Å |
|
 |
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | K | V | G | F | I | G | L | G | I | M | G | K | P | M | S | K | N | L | L | K | A | G | Y | S | L | V | V | A | D | R | N | P | E | A | I | A | D | V | I | A | A | G | A | E | T | A | S | T | A | K | A | I | A | E | Q | C | D | V | I | I | T | M | L | P | N | S | P | H | V | K | E | V | A | L | G | E | N | G | I |
Query Conservation |   |
|
|
|   |
|
|
|
|
|   |
|
|   |   |
|
|   |   |
|
|   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |
|
|
|
Template Conservation |   |
|   |
|
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |
|   |   |   |
|   |   |
|   |
|   |
|   |   |
|   |   |   |   |   |
|   |   |   |
|   |   |   |   | . |   |
|   |
|   |
|   |   |
|
|
|
|
|
|
|
|
|   |   |   |
|
|   | . | . | . | . | . | . |   |
|   |
Template Sequence |   |
K | I | V | V | I | C | G | Y | G | D | V | G | K | G | C | A | S | S | M | K | G | L | G | A | R | V | Y | I | T | E | I | D | P | I | C | A | I | Q | A | V | M | E | G | F | N | V | V | . |
T | L | D | E | I | V | D | K | G | D | F | F | I | T | C | T | G | N | V | D | V | I | K | . |
. |
. |
. |
. |
. |
L | E | H |
Template Known Secondary structure |   |
S |  |  |  |  |  |
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|  |  |  |  |  |
| S |
|  |  |  |  |  |  |  |  | T | T | T |
|  |  |
| . |
|  |  |  |  | T | T | T |
| S |  |  |  |  |
|
| S | S | S | S | S | B |
| . | . | . | . | . | . |  |  |  |
Template Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
| . |
|  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|
|
|
|
|
|
| . | . | . | . | . | . |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
258 | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | |
. | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | |
|
|
|
|
|
. | . | 330 |
  |
  |   |
81 | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | E | G | A | K | P | G | T | V | L | I | D | M | S | S | I |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |
|
|   |
|
|
|
|   |
|   |
|   |   |
Template Sequence |   |
L | L | K | M | K | N | N | A | V | V | G | N | I | G | H | F |
Template Known Secondary structure |   |
 | T | T |
|
| T | T |
|  |  |  |  |
| S | S | T |
Template Predicted Secondary structure |   |
 |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
331 | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|