Job Description P0ABQ2 Confidence 97.56% Date Thu Jan 5 11:16:04 GMT 2012 Rank 342 Aligned Residues 168 % Identity 18% Template c1ebuA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:homoserine dehydrogenase; PDBTitle: homoserine dehydrogenase complex with nad analogue and l-2 homoserine Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.						.	.	.	.	.	30	.	.																		.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query SS confidence																										.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Query Sequence		M	K	V	G	F	I	G	L	G	I	M	G	K	P	M	S	K	N	L	L	K	A	G	Y	.	.	.	.	.	S	L	V	V	A	D	R	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	A	I	A	D	V	I	A	A	G	A	E	T	A	S	T	A	K	A	I	A	E	Q	.	.
Query Conservation																										.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Alig confidence																										.	.	.	.	.									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.
Template Conservation
Template Sequence		V	N	V	A	V	I	G	A	G	V	V	G	S	A	F	L	D	Q	L	L	A	M	K	S	T	I	T	Y	N	L	V	L	L	A	E	A	E	R	S	L	I	S	K	D	F	S	P	L	N	V	G	S	D	W	K	A	A	L	A	A	S	T	T	K	T	L	P	L	D	D	L	I	A	H	L	K	T	S	P	K
Template Known Secondary structure										S												T				S	S										S	S	B					T	T		S			T	T	T	T												B												T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	D	V	I	I	T	M	L	P	N	S	P	H	V	K	E	V	A	L	G	E	N	G	I	I	E	G	A	K	P	G	T	V	L	I	D	M	S	S	I	A	P	L	A	S	R	E	I	S	E	A	L	K	A	K	G	I	D	M	L	D	A	P	V	S	G	G	E	P	K	A	I	D	G	T	L	S	V	M	V
Query Conservation
Alig confidence																																					.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template Sequence		P	V	I	L	V	D	N	T	S	S	A	Y	I	A	G	F	Y	T	K	F	V	E	N	G	I	S	I	A	T	P	N	K	K	A	F	.	.	.	S	S	D	L	A	T	W	K	A	L	F	S	N	K	P	T	N	G	F	V	Y	H	E	A	T	V	G	A	G	L	P	I	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure									S							T	T							T	T									T	T	T	.	.	.	S	S		S							T	S			S	S	S						G	G	G	S	S	T	T	S	T	T	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.																																	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120				.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.										.	.	.	.	.	.	190	.	.	.	.	.	.
Predicted Secondary structure																																																	.	.	.	.	.	.	.	.	.
Query SS confidence																																																	.	.	.	.	.	.	.	.	.
Query Sequence		G	G	D	K	A	I	F	D	K	Y	Y	D	L	M	K	A	M	A	G	S	V	V	H	T	G	E	I	G	A	G	N	V	T	K	L	A	N	Q	V	I	V	A	L	N	I	A	A	.	.	.	.	.	.	.	.	.	M	S	E	A	L	T	L	A	T	K	A	G	V
Query Conservation																																																	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.										.												.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.										.												.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	I	S	F	L	R	E	I	I	Q	.	T	G	D	E	V	E	K	I	E	G	I	.	.	.	.	.	.	.	.	F	S	G	T	L	S	Y	I	F	N	E	F	S	T	S	Q	A	N	D	V	K	F	S	D	V	V	K	V	A	K	K	L	G	Y
Template Known Secondary structure		.	.	.	.	.	.										.		T										.	.	.	.	.	.	.	.													S		S	S																T	T
Template Predicted Secondary structure		.	.	.	.	.	.										.												.	.	.	.	.	.	.	.
Template SS confidence
								153	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.									.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions