|   |
4 | . | . | . | . | . | 10 | . | . | . | . | . | . | . | |
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. | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
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. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | |
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. | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |
|
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|
| . | . |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
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|
|  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
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| . |
. |
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| . |
. |
. |
. |
. |
. |
. |
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
I | E | A | V | F | F | D | C | D | G | T | L | V | D | . |
. |
S | E | V | I | C | S | R | A | Y | V | T | M | F | Q | E | F | . |
. |
. |
. |
. |
. |
. |
G | I | T | L | D | P | E | E | V | F | K | R | F | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | V | K | L | Y | E | I | I | D | I | V | S | L | E | H | G | V |
Query Conservation |   |
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|   |
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|   |
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|   |
| . | . |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   | . | . | . | . | . | . | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
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| . | . |
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| . | . | . | . | . | . | . |
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| . | . | . | . | . | . | . | . | . | . |
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Template Conservation |   |
|
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|   |   |
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|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |
|   |   |   |
|   |   |
|   |   |   |
|
|
|   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
I | R | L | I | F | L | D | I | D | K | T | L | I | P | G | Y | E | P | D | P | A | K | P | I | I | E | E | L | K | D | M | G | F | E | I | I | F | N | S | S | K | T | R | A | E | Q | E | Y | Y | R | K | E | L | E | V | E | T | P | F | I | S | E | N | G | S | A | I | F | I | P | K | G | Y | F | P | Y | I | V | I | E |
Template Known Secondary structure |   |
 |  |  |  |  |  |
|
| B | T | T | T | B | S | S | S |
| S | G | G | G |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |
| S | S |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
| S |
|  |  |  | T | T | T | T |  |  |  |  |
| T | T |
|
|
|
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
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|
|  |  |  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |  |
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|  |  |  |  |
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|  |  |  |
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|  |  |  |  |
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|
Template SS confidence |   |
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  |   |
2 | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . |
  |
  |   |
65 | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | |
|
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|
|
. | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
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|  |  |  |  |  |  |
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|  |  |  |  |  |
|
|  |  |  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
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Query SS confidence |   |
|
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| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
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Query Sequence |   |
T | L | A | K | T | E | A | E | H | V | Y | R | A | E | V | A | R | L | F | D | S | E | L | E | A | I | E | G | A | G | A | L | L | S | A | I | T | A | P | M | C | V | V | S | N | G | P | N | N | K | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
M | Q | H | S | M | G | K | L | N | M | L | H | Y | F | P | D | K | L | F | S |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
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| . | . | . | . | . | . | . | . | . | . |
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|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
L | G | I | R | V | E | K | I | R | E | E | L | K | K | L | E | N | I | Y | G | L | K | Y | Y | G | N | S | T | K | E | E | I | E | K | F | T | G | M | P | P | E | L | V | P | L | A | M | E | R | E | Y | S | E | T | I | F | E | W | S | R | D | G | W | E | E | V | L | V | E | G | G | F | K | V | T | M | G | S | R | F |
Template Known Secondary structure |   |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
| B |
| G | G | G | S |
|  |  |  |  |  |  |  |  |
|
|
| G | G | G |  |  |  |  | T |
|
| S | S |  |  |  |  |
| B |
| S | S | S |
|  |  |  |  |  |  |  | T | T |
|  |  |  |  |
| S | S | S |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
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|
|  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|  |  |
Template SS confidence |   |
|
|
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|
  |   |
92 | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . |
  |
  |   |
135 | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . |
Predicted Secondary structure |   |
|
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|  |  |  |  |  |  |  |  |  |  |  |
|
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|  |  |  |  |  |  |  |
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|  |  |  |  |  |  |  |  |  |
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|  |  |  |  |  |
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|
|  |  |  |  |  |
|
|
|  |  |  |
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
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Query Sequence |   |
G | Y | D | I | Q | R | W | K | P | D | P | A | L | M | F | H | A | A | K | A | M | N | V | N | V | E | N | C | I | L | V | D | D | S | V | A | G | A | Q | S | G | I | D | A | G | M | E | V | F | Y | F | C | A | D | P | H | N | K | P | I | V | H | P | K | V | T | T | F | T | H | L | S | Q | L | P | E | L | W | K |
Query Conservation |   |
  |   |   |   |   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |   |   |
|
|   |   |
|   |   |
|
|   |   |   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |
|
|   |   |
|
|   |
Alig confidence |   |
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| . |
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| . | . | . | . | . | . |
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Template Conservation |   |
  |   |
|   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|   |
|
|
|   |
|
|
|   |
|
|   |   |
|   |   | . |   |
|
|
|   |
|
|   | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |
|   |   |   |   |   |   |
Template Sequence |   |
Y | T | V | H | G | N | S | D | K | G | K | A | A | K | I | L | L | D | F | Y | K | R | L | G | Q | I | E | S | Y | A | V | G | D | S | Y | N | D | F | P | M | F | E | V | V | D | K | . |
V | F | I | V | G | S | L | K | . |
. |
. |
. |
. |
. |
H | K | K | A | Q | N | V | S | S | I | I | D | V | L | E | V | I | K |
Template Known Secondary structure |   |
 |  |  |  |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | S |
|  |  |  |  |  |  |  |
| S | G | G | G |  |  |  |  | T | T | S | S |  | . |  |  |  |  | S | S |
|
| . | . | . | . | . | . |
| T | T |
|  |  |  | S |
|  |  |  |  |  |  |  |  |
|
Template Predicted Secondary structure |   |
 |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
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|
|  |  |  |  |  |  |  |
|
|
| . |  |  |  |  |
|
|
|
| . | . | . | . | . | . |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |
|
Template SS confidence |   |
|
|
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  |   |
172 | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | |
. | . | 220 | . | . | . | . | . | |
|
|
|
|
|
. | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . |
  |