Return to main results Retrieve Phyre Job Id

Job DescriptionP31467
Confidence98.65%DateThu Jan 5 11:47:55 GMT 2012
Rank102Aligned Residues200
% Identity12%Templated1rkqa_
SCOP infoHAD-like HAD-like Predicted hydrolases Cof
Resolution1.40

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10........ .20........ .30.........40.........50.....
Predicted Secondary structure 













.........................









Query SS confidence 

















. . . .









. . . . . . . . . . . . . . . . . . . . .


























Query Sequence  MSRIEAVFFDCDGTLVDS. . . . EVICSRAYVT. . . . . . . . . . . . . . . . . . . . . MFQEFGITLDPEEVFKRFKGVKLYEII
Query Conservation 
  

 



 



 
 ....      
   .....................     
                     
Alig confidence 
.















....









.....................


























Template Conservation 
. 

 
  
 



      
       
  
   
      


                                  
Template Sequence  L. AIKLIAIDMDGTLLLPDHTISPAVKNAIAAARARGVNVVLTTGRPYAGVHNYLKELHMEQPGDYCITYNGALVQKAAD
Template Known Secondary structure 
.








S
TTS


TT

SS
GGGTTT

STT
GGGTTTT
Template Predicted Secondary structure 
.





































Template SS confidence 















































































   2 .......10.........20.........30.........40.........50.........60.........70.........80
 
   56...60.........70...... ...80.........90.........100.........110
Predicted Secondary structure 



.........................














Query SS confidence 




















. . . . . . . . . . . . . . . . . . . . . . . . .

































Query Sequence  DIVSLEHGVTLAKTEAEHVYR. . . . . . . . . . . . . . . . . . . . . . . . . AEVARLFDSELEAIEGAGALLSAITAPMCVVSNG
Query Conservation                       .........................                    
             
Alig confidence 




















.........................

































Template Conservation                                                                                  
Template Sequence  GSTVAQTALSYDDYRFLEKLSREVGSHFHALDRTTLYTANRDISYYTVHESFVATIPLVFCEAEKMDPNTQFLKVMMIDE
Template Known Secondary structure 



B
T

SS


SS

TT



GGGS
TT

B


Template Predicted Secondary structure 




























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   111........120.........130......... 140.........150.........160.........170.........180......
Predicted Secondary structure 















....














Query SS confidence 




























. . . .














































Query Sequence  PNNKMQHSMGKLNMLHYFPDKLFSGYDIQ. . . . RWKPDPALMFHAAKAMNVNVENCILVDDSVAGAQSGIDAGMEVFYFC
Query Conservation                               ....  
                
     


   

  
  

   
 
 
Alig confidence 




























....







































...



Template Conservation                                       
                 
  


  

  

  
 ...  

Template Sequence  PAILDQAIARIPQEVKEKYTVLKSAPYFLEILDKRVNKGTGVKSLADVLGIKPEEIMAIGDQENDIAMIEYAG. . . VGVA
Template Known Secondary structure  S
TTTT
ST

GGG
SGGGSS...
Template Predicted Secondary structure 





















...
Template SS confidence 















































































   161........170.........180.........190.........200.........210.........220.........230... ....
 
   187..190.........200....
Predicted Secondary structure 









Query SS confidence 

















Query Sequence  ADPHNKPIVHPKVTTFTH
Query Conservation                 
  
Alig confidence 

















Template Conservation 
 

    
  

 
   
Template Sequence  VDNAIPSVKEVANFVTKS
Template Known Secondary structure 
TTS

S


Template Predicted Secondary structure 








Template SS confidence 

















   238.240.........250.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions