Return to main results Retrieve Phyre Job Id

Job DescriptionP31467
Confidence98.17%DateThu Jan 5 11:47:55 GMT 2012
Rank117Aligned Residues194
% Identity12%Templatec3pgvB_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:haloacid dehalogenase-like hydrolase; PDBTitle: crystal structure of a haloacid dehalogenase-like hydrolase2 (kpn_04322) from klebsiella pneumoniae subsp. pneumoniae mgh 78578 at3 2.39 a resolution
Resolution2.39 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30... ......40.........50.... .....60....
Predicted Secondary structure 












...........








.......

Query SS confidence 






























. . . . . . . . . . .




















. . . . . . .









Query Sequence  RIEAVFFDCDGTLVDSEVICSRAYVTMFQEF. . . . . . . . . . . GITLDPEEVFKRFKGVKLYEI. . . . . . . IDIVSLEHGV
Query Conservation   

 



 



 
       
        ...........
                    .......          
Alig confidence 






























...........




















.......









Template Conservation   



  





      
       
  
   
  
   


                  
  

  
          
Template Sequence  XYQVVASDLDGTLLSPDHFLTPYAKETLKLLTARGINFVFATGRHYIDVGQIRDNLGIRSYXITSNGARVHDSDGQQIFA
Template Known Secondary structure 

S




S
TTS


TT

SS
GGGGS
S

GGGT
TTS
Template Predicted Secondary structure 

































Template SS confidence 















































































   1........10.........20.........30.........40.........50.........60.........70.........80
 
   65....70.........80... ......90.........100.........110......... 120..
Predicted Secondary structure 

.................















.....
Query SS confidence 


















. . . . . . . . . . . . . . . . .



































. . . . .


Query Sequence  TLAKTEAEHVYRAEVARLF. . . . . . . . . . . . . . . . . DSELEAIEGAGALLSAITAPMCVVSNGPNNKMQHSM. . . . . GKL
Query Conservation                     .................             
                      .....   
Alig confidence 


















.................



































.....


Template Conservation            
                                                                     
Template Sequence  HNLDRDIAADLFEIVRNDPKIVTNVYREDEWYXNRHRPVFNYKLYEPGELDPQGISKVFFTCEDHEHLLPLEQAXNARWG
Template Known Secondary structure 



TTTTTT
TT
TTSS







TT
S

SS
S
G
Template Predicted Secondary structure 

























Template SS confidence 















































































   81........90.........100.........110.........120.........130.........140.........150.........160
 
   123......130.........140.........150.........160.........170.........180.........190.........
Predicted Secondary structure 





































Query SS confidence 












































































Query Sequence  NMLHYFPDKLFSGYDIQRWKPDPALMFHAAKAMNVNVENCILVDDSVAGAQSGIDAGMEVFYFCADPHNKPIVHPKV
Query Conservation                     
                
     


   

  
  

   
 
              
Alig confidence 
























































...
















Template Conservation                
 
    
  
   
          

  

  

  

  
 ...  

  

    
  
 
Template Sequence  DRVNVSFSTLTCLEVXAGGVSKGHALEAVAKXLGYTLSDCIAFGDGXNDAEXLSXAG. . . KGCIXANAHQRLKDLHP
Template Known Secondary structure  GGSSTTTT
STT

GGG
SGGGSS...
TTS

T
Template Predicted Secondary structure 




















...






Template SS confidence 












































































   170.........180.........190.........200.........210.........220...... ...230.........240...
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions