Job Description P31467 Confidence 98.99% Date Thu Jan 5 11:47:55 GMT 2012 Rank 94 Aligned Residues 130 % Identity 15% Template c3ewiB_ PDB info PDB header:transferase Chain: B: PDB Molecule:n-acylneuraminate cytidylyltransferase; PDBTitle: structural analysis of the c-terminal domain of murine cmp-2 sialic acid synthetase Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	I	E	A	V	F	F	D	C	D	G	T	L	V	D	S	E	V	I	C	S	R	A	Y	V	T	M	F	Q	E	F	G	I	T	L	D	P	E	E	V	F	K	R	F	K	G	V	K	L	Y	E	I	I	D	I	V	S	L	E	H	G	V	T	L	A	K	T	E	A	E	H	V	Y	R	A	E	V	A	R	L
Query Conservation
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	I	K	L	L	V	C	N	I	D	G	C	L	T	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure															S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.
		83	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	D	S	E	L	E	A	I	E	G	A	.	.	.	.	.	.	.	.	.	.	.	.	G	A	L	L	S	A	I	T	A	P	M	C	V	V	S	N	G	P	N	N	K	M	Q	H	S	M	G	K	L	N	M	L	H	Y	F	P	D	K	L	F	S	G	Y	D	I	Q	R	W	K	P	D	P	A	L	M	F	H
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.											.	.	.	.	.	.	.	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																																											.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	G	H	I	Y	V	S	G	D	Q	K	E	I	I	S	Y	D	V	K	D	A	I	G	I	S	L	L	K	K	S	G	I	E	V	R	L	I	S	E	R	A	C	S	K	Q	T	L	S	A	L	K	L	D	C	K	T	E	V	S	.	.	.	.	.	.	.	.	.	.	.	V	S	D	K	L	A	T	V	D	E
Template Known Secondary structure		.	S						T	T																					T	T								S	S				T	T	T	T	G	G	G									S	.	.	.	.	.	.	.	.	.	.	.		S
Template Predicted Secondary structure		.																																																											.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80												.	.	.	.	.	.	.	.	.	90
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.
Predicted Secondary structure																																																								.	.	.	.	.	.
Query SS confidence																																																								.	.	.	.	.	.
Query Sequence		A	A	K	A	M	N	V	N	V	E	N	C	I	L	V	D	D	S	V	A	G	A	Q	S	G	I	D	A	G	M	E	V	F	Y	F	C	A	D	P	H	N	K	P	I	V	H	P	K	V	T	T	F	T	H	.	.	.	.	.	.	L	S	Q	L	P	E	L	W
Query Conservation																																																								.	.	.	.	.	.
Alig confidence																															.	.	.																							.	.	.	.	.	.
Template Conservation																															.	.	.
Template Sequence		W	R	K	E	M	G	L	C	W	K	E	V	A	Y	L	G	N	E	V	S	D	E	E	C	L	K	R	V	G	.	.	.	L	S	A	V	P	A	D	A	C	S	G	A	Q	K	A	V	G	Y	I	C	K	C	S	G	G	R	G	A	I	R	E	F	A	E	H	I
Template Known Secondary structure						T	T			G	G	G							S	G	G	G							S	S	.	.	.						T	T								T		S				S	S		T	T	T	T
Template Predicted Secondary structure																															.	.	.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.				120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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