Job Description P31467 Confidence 99.23% Date Thu Jan 5 11:47:55 GMT 2012 Rank 87 Aligned Residues 133 % Identity 17% Template c3e8mD_ PDB info PDB header:transferase Chain: D: PDB Molecule:acylneuraminate cytidylyltransferase; PDBTitle: structure-function analysis of 2-keto-3-deoxy-d-glycero-d-galacto-2 nononate-9-phosphate (kdn) phosphatase defines a new clad within the3 type c0 had subfamily Resolution 1.10 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
Predicted Secondary structure
Query SS confidence
Query Sequence		M	S	R	I	E	A	V	F	F	D	C	D	G	T	L	V	D	S	E	V	I	C	S	R	A	Y	V	T	M	F	Q	E	F	G	I	T	L	D	P	E	E	V	F	K	R	F	K	G	V	K	L	Y	E	I	I	D	I	V	S	L	E	H	G	V	T	L	A	K	T	E	A	E	H	V	Y	R	A	E	V	A
Query Conservation
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		M	K	E	I	K	L	I	L	T	D	I	D	G	V	W	T	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure						S						S	T	T	T	T	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.
		81	.	.	.	.	.	.	.	.	90	.	.	.													.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	L	F	D	S	E	L	E	A	I	E	G	A	.	.	.	.	.	.	.	.	.	.	.	.	G	A	L	L	S	A	I	T	A	P	M	C	V	V	S	N	G	P	N	N	K	M	Q	H	S	M	G	K	L	N	M	L	H	Y	F	P	D	K	L	F	S	G	Y	D	I	Q	R	W	K	P	D	P	A	L	M
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.											.	.	.	.	.	.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.																																																										.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	G	G	M	F	Y	D	Q	T	G	N	E	W	K	K	F	N	T	S	D	S	A	G	I	F	W	A	H	N	K	G	I	P	V	G	I	L	T	G	E	K	T	E	I	V	R	R	R	A	E	K	L	K	V	D	Y	L	F	.	.	.	.	.	.	.	.	.	.	Q	G	V	V	D	K	L	S	A	A
Template Known Secondary structure		.	.	.	S						S	S	S								G	G	G										T	T								S													T	T		S				.	.	.	.	.	.	.	.	.	.		S		S
Template Predicted Secondary structure		.	.	.																																																										.	.	.	.	.	.	.	.	.	.
Template SS confidence
					18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.											.	.	.	.	.	80	.	.	.	.
		149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.
Predicted Secondary structure																																																										.	.	.	.	.	.
Query SS confidence																																																										.	.	.	.	.	.
Query Sequence		F	H	A	A	K	A	M	N	V	N	V	E	N	C	I	L	V	D	D	S	V	A	G	A	Q	S	G	I	D	A	G	M	E	V	F	Y	F	C	A	D	P	H	N	K	P	I	V	H	P	K	V	T	T	F	T	H	.	.	.	.	.	.	L	S	Q	L	P	E	L	W
Query Conservation																																																										.	.	.	.	.	.
Alig confidence																																	.	.	.																							.	.	.	.	.	.
Template Conservation																																	.	.	.
Template Sequence		E	E	L	C	N	E	L	G	I	N	L	E	Q	V	A	Y	I	G	D	D	L	N	D	A	K	L	L	K	R	V	G	.	.	.	I	A	G	V	P	A	S	A	P	F	Y	I	R	R	L	S	T	I	F	L	E	K	R	G	G	E	G	V	F	R	E	F	V	E	K	V
Template Known Secondary structure									T			G	G	G							S	G	G	G					T	T	S	S	.	.	.						T	T	S						T	T		S	S						T	T	T	T
Template Predicted Secondary structure																																	.	.	.
Template SS confidence
		85	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions