Return to main results Retrieve Phyre Job Id

Job DescriptionP31467
Confidence99.93%DateThu Jan 5 11:47:55 GMT 2012
Rank28Aligned Residues212
% Identity16%Templatec2no5B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:(s)-2-haloacid dehalogenase iva; PDBTitle: crystal structure analysis of a dehalogenase with intermediate complex
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.........20.........30......... 40.........50.........60.........70...
Predicted Secondary structure 



















.......







Query SS confidence 






































. . . . . . .

































Query Sequence  MSRIEAVFFDCDGTLVDSEVICSRAYVTMFQEFGITLDP. . . . . . . EEVFKRFKGVKLYEIIDIVSLEHGVTLAKTEAEH
Query Conservation 
  

 



 



 
       
        
     .......                                  
Alig confidence 










.


























.......

































Template Conservation     






 .




                                                               
Template Sequence  VDSLRACVFAY. GTLLDVHSAVMRNADEVGASAEALSMLWRQRQLEYSWTRTLMHQYADFWQLTDEALTFALRTYHLEDR
Template Known Secondary structure 






B.TTTB
TTT
TTTT



TT
TT
Template Predicted Secondary structure 






.




















Template SS confidence 















































































   2.......10.. .......20.........30.........40.........50.........60.........70.........80
 
   74.....80.........90.........100.... .....110.........120.........130.........140.........150.
Predicted Secondary structure 













..




















Query SS confidence 






























. .














































Query Sequence  VYRAEVARLFDSELEAIEGAGALLSAITAPM. . CVVSNGPNNKMQHSMGKLNMLHYFPDKLFSGYDIQRWKPDPALMFHA
Query Conservation                         
       ..                                     
         
Alig confidence 






























..














































Template Conservation                         
  
          
                                
         
Template Sequence  KGLKDRLMSAYKELSAYPDAAETLEKLKSAGYIVAILSNGNDEMLQAALKASKLDRVLDSCLSADDLKIYKPDPRIYQFA
Template Known Secondary structure  T

B
TTTTT
SS
T
GGG
ST

TTS
Template Predicted Secondary structure 






































Template SS confidence 















































































   82.......90.........100.........110.........120.........130.........140.........150.........160.
 
   152.......160.........170.........180.........190..... ....200.........210...
Predicted Secondary structure 















.




Query SS confidence 











































.

















Query Sequence  AKAMNVNVENCILVDDSVAGAQSGIDAGMEVFYFCADPHNKPIV. HPKVTTFTHLSQLPELWK
Query Conservation         
     


   

  
  

   
 
          .      
  
 

  

 
Alig confidence 











































.

















Template Conservation         
     


   

  
  

   
 
              
  
 

 

  

 
Template Sequence  CDRLGVNPNEVCFVSSNAWDLGGAGKFGFNTVRINRQGNPPEYEFAPLKHQVNSLSELWPLLA
Template Known Secondary structure  T

GGGS
T

SS





TTS

SSSGGG
Template Predicted Secondary structure 





























Template SS confidence 






























































   162.......170.........180.........190.........200.........210.........220....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions