Job Description P31467 Confidence 99.77% Date Thu Jan 5 11:47:55 GMT 2012 Rank 65 Aligned Residues 209 % Identity 12% Template c1zjjA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:hypothetical protein ph1952; PDBTitle: crystal structure of hypothetical protein ph1952 from pyrococcus2 horikoshii ot3 Resolution 1.85 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.			.	.	30	.	.	.	.	.										.	.	.	.	40	.	.	.	.	.	.	.	.	.	50															.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.									.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.									.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	E	A	V	F	F	D	C	D	G	T	L	V	D	S	E	V	I	C	S	R	A	Y	V	.	.	T	M	F	Q	E	F	G	I	.	.	.	.	.	.	.	.	.	T	L	D	P	E	E	V	F	K	R	F	K	G	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	Y	E	I	I	D	I	V
Query Conservation																										.	.									.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.									.	.	.	.	.	.	.	.	.																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	V	A	I	I	F	D	M	D	G	V	L	Y	R	G	N	R	A	I	P	G	V	R	E	L	I	E	F	L	K	E	R	G	I	P	F	A	F	L	T	N	N	S	T	K	T	P	E	M	Y	R	E	K	L	L	K	M	G	I	D	V	S	S	S	I	I	I	T	S	G	L	A	T	R	L	Y	M	S	K	H
Template Known Secondary structure										B	T	T	T			T	T				T	T												T								S			S	S											T	T	T					G	G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		59	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.																					.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.				.	.
Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query SS confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Query Sequence		S	L	E	H	G	V	T	L	A	K	T	E	A	E	H	V	Y	R	A	E	V	A	R	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	S	E	L	E	A	I	E	G	A	G	A	L	L	S	A	I	T	A	P	M	C	V	V	S	N	G	P	N	N	.	.	.	K	M
Query Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Alig confidence																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.
Template Conservation
Template Sequence		L	D	P	G	K	I	F	V	I	G	G	E	G	L	V	K	E	M	Q	A	L	G	W	G	I	V	T	L	D	E	A	R	Q	G	S	W	K	E	V	K	H	V	V	V	G	L	D	P	D	L	T	Y	E	K	L	K	Y	A	T	L	A	I	R	N	G	A	T	F	I	G	T	N	P	D	A	T	L	P	G	E
Template Known Secondary structure		S									S												T	S		B								T	T	G	G	G	G										T	T															T	T						S				S					T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	H	S	M	G	K	L	N	M	L	H	Y	F	P	D	K	L	F	S	G	Y	D	I	Q	R	W	K	P	D	P	A	L	M	F	H	A	A	K	A	M	N	V	N	V	E	N	C	I	L	V	D	D	S	V	A	G	A	Q	S	G	I	D	A	G	M	E	V	F	Y	F	C	A	D	P	H	N	K	P	I	V
Query Conservation
Alig confidence																																											.
Template Conservation																																											.
Template Sequence		E	G	I	Y	P	G	A	G	S	I	I	A	A	L	K	V	A	T	N	V	E	P	I	I	I	G	K	P	N	E	P	M	Y	E	V	V	R	E	M	F	P	.	G	E	E	L	W	M	V	G	D	R	L	D	T	D	I	A	F	A	K	K	F	G	M	K	A	I	M	V	L	T	G	V	S	S	L	E	D	I
Template Known Secondary structure		T																									S	T	T	S											S	T	.	T								S		T	T	T								T	T							S	S	S	S
Template Predicted Secondary structure																																											.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.		.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		196	.					.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.
Predicted Secondary structure				.	.	.	.
Query SS confidence				.	.	.	.
Query Sequence		H	P	.	.	.	.	K	V	T	T	F	T	H	L	S	Q	L	P	E	L	W	K
Query Conservation				.	.	.	.
Alig confidence				.	.	.	.
Template Conservation
Template Sequence		K	K	S	E	Y	K	P	D	L	V	L	P	S	V	Y	E	L	I	D	Y	L	K
Template Known Secondary structure		T	T		S	S			S				S	S	G	G	G	G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions